Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS01125 and ABID97_RS01130 are separated by 290 nucleotidesABID97_RS01130 and ABID97_RS01135 are separated by 80 nucleotidesABID97_RS01135 and ABID97_RS01140 are separated by 210 nucleotidesABID97_RS01140 and ABID97_RS01145 are separated by 31 nucleotides ABID97_RS01125: ABID97_RS01125 - type 1 glutamine amidotransferase domain-containing protein, at 227,136 to 227,708 _RS01125 ABID97_RS01130: ABID97_RS01130 - tripartite tricarboxylate transporter substrate-binding protein, at 227,999 to 228,973 _RS01130 ABID97_RS01135: ABID97_RS01135 - carboxypeptidase regulatory-like domain-containing protein, at 229,054 to 231,153 _RS01135 ABID97_RS01140: ABID97_RS01140 - LuxR C-terminal-related transcriptional regulator, at 231,364 to 232,350 _RS01140 ABID97_RS01145: ABID97_RS01145 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 232,382 to 234,502 _RS01145
Group Condition ABID97_RS01125 ABID97_RS01130 ABID97_RS01135 ABID97_RS01140 ABID97_RS01145
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.7 -0.2 -0.6 -0.2
carbon source D-Fructose (C) N.D. -0.6 -0.3 -0.2 -0.1
carbon source casaminos (C) N.D. +0.3 -0.5 -0.2 -0.3
plant outgrowth control Plant outgrowth control N.D. -0.5 +0.3 +0.3 -0.1
carbon source D-Serine (C) N.D. +0.6 +0.0 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.6 -0.1 +0.3 -0.1
carbon source Tween 20 (C) N.D. +0.4 +0.2 +0.3 -0.1
carbon source D-Mannose (C) N.D. +0.3 +0.3 +0.3 +0.1
carbon source a-Ketoglutaric (C) N.D. +0.5 +0.4 +0.1 +0.1
carbon source L-Alanine (C) N.D. +0.5 +0.2 +0.4 +0.0
carbon source butyrate (C) N.D. +0.4 +0.2 +0.3 +0.1
carbon source D-Glucuronic Acid (C) N.D. +0.3 +0.5 +0.1 +0.2
carbon source D-Mannose (C) N.D. +0.2 +0.4 +0.4 +0.1
carbon source L-Threonine (C) N.D. +0.5 +0.5 +0.1 +0.1
carbon source a-Ketoglutaric (C) N.D. +0.6 +0.3 +0.1 +0.2
carbon source L-Histidine (C) N.D. +0.5 +0.2 +0.5 +0.2
carbon source Ethanol (C) N.D. +0.6 +0.6 -0.1 +0.2
carbon source Adenine (C) N.D. +0.5 +0.4 +0.3 +0.2
carbon source L-Arabinose (C) N.D. +0.2 +0.2 +0.7 +0.2
carbon source D,L-Lactate (C) N.D. +0.6 +0.4 +0.2 +0.2
carbon source L-tyrosine (C) N.D. +0.6 +0.3 +0.4 +0.1
carbon source Glucuronamide (C) N.D. +0.5 +0.5 +0.2 +0.2
carbon source L-Threonine (C) N.D. +0.6 +0.4 +0.3 +0.2
carbon source L-Asparagine (C) N.D. +0.7 +0.4 +0.1 +0.1
carbon source D-Sorbitol (C) N.D. +0.7 +0.4 +0.1 +0.2
carbon source L-Fucose (C) N.D. +0.6 +0.4 +0.3 +0.1
carbon source L-Malic (C) N.D. +0.6 +0.3 +0.4 +0.1
carbon source L-Arabinose (C) N.D. +0.5 +0.5 +0.3 +0.2
carbon source L-Tryptophan (C) N.D. +0.4 +0.5 +0.4 +0.3
carbon source D,L-Malic Acid (C) N.D. +0.9 +0.5 +0.3 +0.1
remove
ABID97_RS01125
plot		 remove
ABID97_RS01130
plot		 remove
ABID97_RS01135		 remove
ABID97_RS01140
plot		 remove
ABID97_RS01145
plot