Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01100 and ABID97_RS01105 are separated by 166 nucleotidesABID97_RS01105 and ABID97_RS01110 are separated by 61 nucleotidesABID97_RS01110 and ABID97_RS01115 are separated by 46 nucleotidesABID97_RS01115 and ABID97_RS01120 overlap by 2 nucleotides ABID97_RS01100: ABID97_RS01100 - ABC transporter ATP-binding protein, at 222,458 to 223,270 _RS01100 ABID97_RS01105: ABID97_RS01105 - AMP-binding protein, at 223,437 to 224,684 _RS01105 ABID97_RS01110: ABID97_RS01110 - citrate/2-methylcitrate synthase, at 224,746 to 225,000 _RS01110 ABID97_RS01115: ABID97_RS01115 - citrate/2-methylcitrate synthase, at 225,047 to 225,946 _RS01115 ABID97_RS01120: ABID97_RS01120 - citrate synthase, at 225,945 to 227,111 _RS01120
Group Condition ABID97_RS01100 ABID97_RS01105 ABID97_RS01110 ABID97_RS01115 ABID97_RS01120
carbon source Tween 20 (C) -0.4 -5.7 -0.1 N.D. -0.2
carbon source L-Tryptophan (C) -0.4 -2.8 +0.1 N.D. -2.9
carbon source Gly-Glu (C) -0.1 -2.7 -0.7 N.D. -1.0
carbon source casaminos (C) +0.1 -1.0 -0.3 N.D. -2.2
carbon source D-Arabinose (C) -0.5 -0.1 -0.3 N.D. -2.4
carbon source D-Lactate (C) +0.1 -0.2 -0.2 N.D. -2.8
carbon source D-Glucose (C) -0.5 -1.8 -0.5 N.D. -0.2
carbon source D-Fructose (C) -0.3 -1.2 -0.0 N.D. -1.5
carbon source L-Histidine (C) +0.2 -3.5 +0.3 N.D. +0.3
carbon source casaminos (C) +0.0 -2.5 -0.0 N.D. -0.1
carbon source L-Histidine (C) -0.0 -1.5 +0.7 N.D. -1.7
carbon source D,L-Malic Acid (C) +0.2 +0.0 +0.1 N.D. -2.9
carbon source L-Threonine (C) +0.3 -1.8 +0.4 N.D. -1.0
carbon source 2-Deoxy-D-Ribose (C) +0.4 -2.4 -0.2 N.D. +0.2
carbon source Fumarate (C) -0.6 -1.1 -0.4 N.D. +0.3
carbon source Tween 20 (C) +0.6 -2.7 +0.6 N.D. -0.0
carbon source L-Threonine (C) +0.2 -2.0 +0.5 N.D. +0.3
carbon source L-tyrosine (C) +0.2 -1.7 +0.4 N.D. +0.2
carbon source D-Gluconic Acid (C) +0.1 -1.2 +0.2 N.D. +0.9
carbon source L-Alanine (C) +0.6 -1.9 -0.2 N.D. +1.6
carbon source D-Glucose (C) +0.2 -1.6 +0.3 N.D. +1.3
carbon source D-Glucuronic Acid (C) +0.5 -1.1 +0.8 N.D. +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.5 -1.0 +0.5 N.D. +0.5
carbon source L-Fucose (C) +0.5 -0.7 +0.4 N.D. +0.8
carbon source a-Ketoglutaric (C) +0.6 +1.2 +0.0 N.D. -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +2.2 -0.1 N.D. -0.6
carbon source L-tyrosine (C) +1.3 -1.0 +0.7 N.D. +1.4
carbon source propionate (C) +1.5 -0.4 +0.8 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.8 +0.3 N.D. -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +5.8 -0.2 N.D. -0.5
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