Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01070 and ABID97_RS01075 are separated by 84 nucleotidesABID97_RS01075 and ABID97_RS01080 overlap by 4 nucleotidesABID97_RS01080 and ABID97_RS01085 are separated by 164 nucleotidesABID97_RS01085 and ABID97_RS01090 are separated by 3 nucleotides ABID97_RS01070: ABID97_RS01070 - Crp/Fnr family transcriptional regulator, at 215,229 to 215,999 _RS01070 ABID97_RS01075: ABID97_RS01075 - AMP-binding protein, at 216,084 to 218,039 _RS01075 ABID97_RS01080: ABID97_RS01080 - ABC transporter ATP-binding protein, at 218,036 to 218,821 _RS01080 ABID97_RS01085: ABID97_RS01085 - branched-chain amino acid ABC transporter permease, at 218,986 to 219,915 _RS01085 ABID97_RS01090: ABID97_RS01090 - branched-chain amino acid ABC transporter permease, at 219,919 to 220,983 _RS01090
Group Condition ABID97_RS01070 ABID97_RS01075 ABID97_RS01080 ABID97_RS01085 ABID97_RS01090
carbon source L-Lactate (C) -0.6 -0.2 -0.3 N.D. -0.7
carbon source D-Fructose (C) -0.6 +0.0 -0.2 N.D. -0.5
carbon source D-Xylose (C) -0.6 -0.0 -0.3 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 +0.2 +0.1 N.D. +0.1
carbon source butyrate (C) -1.3 +0.0 -0.2 N.D. +0.5
carbon source D-Gluconic Acid (C) -0.6 +0.2 -0.2 N.D. -0.1
carbon source L-Alanine (C) -1.2 +0.3 -0.2 N.D. +0.2
carbon source a-Ketoglutaric (C) -0.5 +0.4 -0.4 N.D. -0.2
carbon source L-Fucose (C) -1.0 +0.3 +0.0 N.D. -0.1
carbon source Gly-Glu (C) +0.2 +0.3 -0.3 N.D. -0.5
carbon source L-Alanine (C) -0.8 +0.2 +0.1 N.D. +0.2
phage V2_100 +0.7 -0.4 -0.3 N.D. -0.1
carbon source D-Glucuronic Acid (C) -0.5 +0.7 -0.2 N.D. -0.2
carbon source D-Galactose (C) -0.7 +0.1 +0.3 N.D. +0.2
carbon source L-Arabinose (C) +0.5 +0.1 -0.4 N.D. -0.3
carbon source L-Phenylalanine (C) +0.6 +0.0 -0.2 N.D. -0.5
carbon source D,L-Malic Acid (C) -0.4 -0.3 +0.3 N.D. +0.4
carbon source Formate (C) -0.5 +0.2 +0.4 N.D. +0.2
carbon source D-Arabinose (C) -0.2 +0.9 -0.2 N.D. -0.3
carbon source L-Fucose (C) -0.4 +0.4 -0.0 N.D. +0.5
carbon source D-Glucose (C) +0.3 +0.4 -0.2 N.D. +0.3
carbon source D-Arabinose (C) -0.4 +1.0 +0.0 N.D. +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.8 +0.2 +1.6 N.D. -0.2
carbon source Adenine (C) -0.4 +0.4 +0.3 N.D. +0.5
carbon source L-tyrosine (C) +1.1 -0.1 -0.1 N.D. -0.0
carbon source butyrate (C) -0.1 +0.4 +0.1 N.D. +0.5
control NP +0.6 +0.2 +0.1 N.D. +0.2
carbon source D-Mannose (C) +0.4 +0.5 +0.1 N.D. +0.4
carbon source Glucuronamide (C) +0.2 +0.5 +0.1 N.D. +0.8
carbon source L-tyrosine (C) -0.6 +0.2 +1.8 N.D. +0.1
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