Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01005 and ABID97_RS01010 are separated by 4 nucleotidesABID97_RS01010 and ABID97_RS01015 are separated by 13 nucleotidesABID97_RS01015 and ABID97_RS01020 are separated by 13 nucleotidesABID97_RS01020 and ABID97_RS01025 are separated by 11 nucleotides ABID97_RS01005: ABID97_RS01005 - two-component system response regulator KdpE, at 202,466 to 203,158 _RS01005 ABID97_RS01010: ABID97_RS01010 - DUF4118 domain-containing protein, at 203,163 to 205,907 _RS01010 ABID97_RS01015: ABID97_RS01015 - potassium-transporting ATPase subunit KdpC, at 205,921 to 206,502 _RS01015 ABID97_RS01020: ABID97_RS01020 - potassium-transporting ATPase subunit KdpB, at 206,516 to 208,606 _RS01020 ABID97_RS01025: ABID97_RS01025 - potassium-transporting ATPase subunit KdpA, at 208,618 to 210,342 _RS01025
Group Condition ABID97_RS01005 ABID97_RS01010 ABID97_RS01015 ABID97_RS01020 ABID97_RS01025
phage V2_10 +0.0 +0.1 -0.7 -0.2 -0.3
carbon source butyrate (C) +0.2 +0.3 -1.2 +0.1 -0.3
carbon source L-Arabinose (C) +0.2 +0.0 +0.1 -0.6 -0.6
carbon source L-Histidine (C) +0.3 -0.2 -0.9 +0.2 -0.1
carbon source L-Alanine (C) +0.4 -0.1 -0.4 +0.2 -0.4
r2a outgrowth control R2A outgrowth control -0.1 +0.1 +0.6 -0.7 -0.3
carbon source Ethanol (C) +0.3 +0.1 -0.6 +0.3 -0.3
carbon source D,L-Malic Acid (C) -0.2 -0.2 -0.2 +0.7 -0.3
r2a outgrowth control R2A outgrowth control -0.1 -0.1 +0.7 -0.4 -0.1
carbon source L-tyrosine (C) -0.8 -0.3 +0.4 +0.3 +0.4
carbon source D-Mannose (C) +0.0 +0.3 +0.4 -0.2 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.6 +1.0 -0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 +0.6 -0.6 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.6 +0.7 -0.3 +0.2
carbon source succinate (C) +0.2 +0.1 +0.6 -0.6 +0.0
carbon source a-Ketoglutaric (C) +0.5 +0.6 -0.3 -0.4 +0.0
carbon source Glycolic Acid (C) +0.2 -0.1 +0.8 -0.2 -0.3
carbon source L-Glutamine (C) +0.4 +0.0 +0.6 -0.5 +0.0
carbon source Tween 20 (C) +0.3 +0.1 +0.7 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.8 +0.9 +0.6 -0.2
carbon source D,L-Malic Acid (C) -0.0 +0.3 +0.8 -0.2 -0.1
carbon source D-Ribose (C) +0.5 +0.0 +1.1 -0.5 -0.1
carbon source D-Xylose (C) +0.2 +0.2 +0.5 +0.3 -0.1
carbon source D-Gluconic Acid (C) -0.1 +0.5 +0.7 +0.1 -0.0
carbon source propionate (C) +0.3 -0.2 +1.1 +0.1 -0.0
carbon source L-Asparagine (C) -0.0 +0.1 +1.0 +0.3 -0.2
carbon source Tween 20 (C) +0.0 +0.2 +1.0 +0.3 -0.2
carbon source D-Galactose (C) +0.6 +0.2 +0.5 +0.2 -0.0
carbon source L-Lactate (C) +0.3 +0.2 +0.8 +0.1 +0.2
carbon source propionate (C) +0.3 +0.2 +1.0 +0.4 +0.0
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