Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS00875 and ABID97_RS00880 are separated by 31 nucleotidesABID97_RS00880 and ABID97_RS00885 are separated by 151 nucleotidesABID97_RS00885 and ABID97_RS00890 are separated by 9 nucleotidesABID97_RS00890 and ABID97_RS00895 are separated by 83 nucleotides ABID97_RS00875: ABID97_RS00875 - phytanoyl-CoA dioxygenase family protein, at 176,460 to 177,212 _RS00875 ABID97_RS00880: ABID97_RS00880 - AMP nucleosidase, at 177,244 to 178,761 _RS00880 ABID97_RS00885: ABID97_RS00885 - tripartite tricarboxylate transporter substrate binding protein, at 178,913 to 179,872 _RS00885 ABID97_RS00890: ABID97_RS00890 - helix-turn-helix transcriptional regulator, at 179,882 to 180,595 _RS00890 ABID97_RS00895: ABID97_RS00895 - cytochrome P450, at 180,679 to 181,851 _RS00895
Group Condition ABID97_RS00875 ABID97_RS00880 ABID97_RS00885 ABID97_RS00890 ABID97_RS00895
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.4 +0.0 +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.2 -0.2 +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -2.4 +0.0 -0.3 N.D.
carbon source L-Fucose (C) -0.2 -0.1 -0.6 -0.5 N.D.
carbon source L-Alanine (C) -0.1 +0.2 -0.4 -0.6 N.D.
carbon source L-Leucine (C) -0.3 +0.2 -0.3 -0.3 N.D.
carbon source D-Arabinose (C) -0.0 +0.3 -0.6 -0.3 N.D.
carbon source butyrate (C) -0.3 +0.3 -0.5 -0.1 N.D.
carbon source Glycolic Acid (C) +0.1 -0.3 -0.5 +0.2 N.D.
carbon source Formate (C) -0.2 +0.3 -0.3 -0.3 N.D.
carbon source D-Serine (C) +0.1 +0.3 -0.2 -0.6 N.D.
carbon source D-Fructose (C) +0.3 -0.9 +0.1 +0.2 N.D.
carbon source D-Fructose (C) +0.2 -0.6 -0.4 +0.4 N.D.
carbon source D,L-Malic Acid (C) +0.2 +0.1 +0.5 -1.1 N.D.
carbon source L-Threonine (C) +0.1 +0.3 -0.5 -0.1 N.D.
carbon source D-Glucose (C) +0.2 +0.2 -0.4 -0.2 N.D.
carbon source L-tyrosine (C) +0.4 -0.3 -0.2 +0.1 N.D.
carbon source L-Phenylalanine (C) +0.2 +0.3 -0.0 -0.4 N.D.
carbon source L-Leucine (C) +0.3 +0.4 +0.1 -0.6 N.D.
carbon source Glucuronamide (C) -0.1 +0.3 -0.4 +0.3 N.D.
carbon source L-Proline (C) +0.1 +0.4 -0.5 +0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +1.0 -0.2 -0.0 N.D.
carbon source D,L-Lactate (C) +0.2 +0.4 -0.3 +0.3 N.D.
carbon source Glycerol (C) +0.2 +0.4 -0.3 +0.2 N.D.
carbon source Glycerol (C) +0.3 +0.5 +0.0 -0.2 N.D.
carbon source D-Glucuronic Acid (C) +0.0 +0.7 -0.2 +0.1 N.D.
carbon source L-tyrosine (C) +0.6 +0.1 -0.8 +1.0 N.D.
carbon source Glucuronamide (C) +0.7 +0.3 -0.0 +0.1 N.D.
carbon source propionate (C) +0.6 +0.2 +1.3 -0.6 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +2.0 -0.6 +0.3 N.D.
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