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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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500 nt
ABID97_RS00695 and ABID97_RS00700 are separated by 42 nucleotides
ABID97_RS00700 and ABID97_RS00705 are separated by 72 nucleotides
ABID97_RS00705 and ABID97_RS00710 are separated by 44 nucleotides
ABID97_RS00710 and ABID97_RS00715 are separated by 14 nucleotides
ABID97_RS00695: ABID97_RS00695 - D-alanyl-D-alanine carboxypeptidase family protein, at 139,196 to 140,365
_RS00695
ABID97_RS00700: ABID97_RS00700 - alpha/beta fold hydrolase, at 140,408 to 141,046
_RS00700
ABID97_RS00705: ABID97_RS00705 - (2Fe-2S) ferredoxin domain-containing protein, at 141,119 to 141,472
_RS00705
ABID97_RS00710: ABID97_RS00710 - VanZ family protein, at 141,517 to 142,632
_RS00710
ABID97_RS00715: ABID97_RS00715 - CopD family protein, at 142,647 to 143,075
_RS00715
Group
Condition
ABID97
_RS00695
ABID97
_RS00700
ABID97
_RS00705
ABID97
_RS00710
ABID97
_RS00715
carbon source
L-Histidine (C)
+0.0
N.D.
-0.5
-0.7
N.D.
carbon source
Adenine (C)
-0.4
N.D.
-0.3
-0.3
N.D.
carbon source
L-Alanine (C)
-0.3
N.D.
-0.3
-0.2
N.D.
carbon source
L-Lactate (C)
-0.6
N.D.
+0.1
-0.3
N.D.
carbon source
Glucuronamide (C)
-0.6
N.D.
+0.2
-0.3
N.D.
carbon source
L-Malic (C)
-0.8
N.D.
+0.4
-0.2
N.D.
carbon source
Gly-Glu (C)
-0.4
N.D.
+0.2
-0.4
N.D.
carbon source
L-Malic (C)
-0.7
N.D.
+0.5
-0.3
N.D.
carbon source
succinate (C)
-0.5
N.D.
+0.3
-0.3
N.D.
carbon source
Glycolic Acid (C)
-0.2
N.D.
+0.2
-0.5
N.D.
carbon source
succinate (C)
-0.5
N.D.
+0.4
-0.4
N.D.
carbon source
L-Lactate (C)
-0.5
N.D.
+0.5
-0.4
N.D.
carbon source
Fumarate (C)
-0.3
N.D.
+0.3
-0.4
N.D.
carbon source
D-Gluconic Acid (C)
-0.1
N.D.
+0.3
-0.5
N.D.
carbon source
D-Serine (C)
-0.2
N.D.
+0.3
-0.4
N.D.
carbon source
D-Serine (C)
-0.2
N.D.
+0.4
-0.4
N.D.
carbon source
L-Asparagine (C)
-0.2
N.D.
+0.4
-0.3
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.4
N.D.
+0.6
-0.4
N.D.
carbon source
a-Ketoglutaric (C)
-0.4
N.D.
+0.5
-0.2
N.D.
carbon source
L-Glutamine (C)
-0.1
N.D.
+0.4
-0.4
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
N.D.
+0.4
-0.3
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
+0.4
-0.4
N.D.
carbon source
butyrate (C)
-0.4
N.D.
+0.6
-0.2
N.D.
carbon source
D,L-Malic Acid (C)
-0.5
N.D.
+1.1
-0.6
N.D.
carbon source
L-tyrosine (C)
-0.2
N.D.
+0.6
-0.3
N.D.
carbon source
butyrate (C)
-0.3
N.D.
+0.6
-0.2
N.D.
carbon source
propionate (C)
-0.2
N.D.
+0.6
-0.2
N.D.
carbon source
propionate (C)
-0.1
N.D.
+0.7
-0.2
N.D.
phage
V2_10
+0.2
N.D.
+0.3
+0.5
N.D.
phage
V2_100
+1.3
N.D.
+0.2
+0.6
N.D.
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