Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS00570 and ABID97_RS00575 overlap by 32 nucleotidesABID97_RS00575 and ABID97_RS00580 are separated by 122 nucleotidesABID97_RS00580 and ABID97_RS00585 are separated by 109 nucleotidesABID97_RS00585 and ABID97_RS00590 are separated by 97 nucleotides ABID97_RS00570: ABID97_RS00570 - HPr family phosphocarrier protein, at 121,954 to 122,223 _RS00570 ABID97_RS00575: ABID97_RS00575 - PTS fructose transporter subunit IIA, at 122,192 to 122,647 _RS00575 ABID97_RS00580: ABID97_RS00580 - hypothetical protein, at 122,770 to 123,282 _RS00580 ABID97_RS00585: ABID97_RS00585 - TlpA disulfide reductase family protein, at 123,392 to 123,889 _RS00585 ABID97_RS00590: ABID97_RS00590 - cytochrome c, at 123,987 to 124,433 _RS00590
Group Condition ABID97_RS00570 ABID97_RS00575 ABID97_RS00580 ABID97_RS00585 ABID97_RS00590
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.1 N.D. +1.1 -4.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 N.D. -0.4 -5.4 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.4 N.D. +1.2 -5.9 +1.2
carbon source 4-Hydroxybenzoic Acid (C) -0.5 N.D. -0.8 -1.7 -0.4
carbon source acetate (C) -1.8 N.D. -0.3 -1.0 -0.1
carbon source acetate (C) -2.3 N.D. +0.3 -0.9 -0.3
plant outgrowth control Plant outgrowth control +0.2 N.D. +0.2 -2.2 -0.6
carbon source L-Alanine (C) +0.8 N.D. +0.1 -2.5 -0.6
carbon source Adenine (C) +1.4 N.D. -0.1 -3.7 +0.3
carbon source Adenine (C) +1.5 N.D. -0.2 -3.5 +0.2
carbon source Tween 20 (C) +1.1 N.D. +0.4 -2.0 -1.2
carbon source D-Arabinose (C) +1.6 N.D. -0.1 -2.3 +0.0
carbon source Tween 20 (C) +1.1 N.D. +0.5 -2.2 -0.1
carbon source D-Arabinose (C) +2.1 N.D. -0.1 -2.1 -0.2
carbon source D-Gluconic Acid (C) +1.4 N.D. -0.4 -0.6 -0.6
carbon source Gly-Glu (C) +1.8 N.D. -0.1 -1.0 -0.4
carbon source L-Leucine (C) +0.9 N.D. +0.8 -1.0 -0.2
carbon source L-Threonine (C) +1.8 N.D. -0.0 -1.0 -0.1
carbon source 2-Deoxy-D-Ribose (C) +1.1 N.D. +0.5 -1.1 +0.2
carbon source Gly-Glu (C) +2.1 N.D. -0.2 -0.6 -0.2
carbon source D-Glucose (C) +2.4 N.D. +0.0 -0.5 -0.6
carbon source L-Threonine (C) +2.1 N.D. +0.4 -0.9 -0.1
carbon source Glycerol (C) +2.4 N.D. +0.1 -0.7 -0.3
carbon source Glycerol (C) +2.3 N.D. +0.2 -0.5 -0.3
carbon source D-Xylose (C) +2.5 N.D. +0.1 -0.4 -0.4
carbon source L-Phenylalanine (C) +2.4 N.D. +0.4 -0.3 -0.5
carbon source D-Xylose (C) +2.4 N.D. +0.3 -0.4 -0.1
carbon source D-Glucuronic Acid (C) +5.9 N.D. -0.7 -1.8 -0.0
carbon source butyrate (C) +1.0 N.D. +0.1 +4.9 -0.5
carbon source butyrate (C) +0.9 N.D. -0.0 +5.6 +0.4
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ABID97_RS00570
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