Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS00535 and ABID97_RS00540 are separated by 106 nucleotidesABID97_RS00540 and ABID97_RS00545 overlap by 4 nucleotidesABID97_RS00545 and ABID97_RS00550 are separated by 109 nucleotidesABID97_RS00550 and ABID97_RS00555 are separated by 112 nucleotides ABID97_RS00535: ABID97_RS00535 - NADP-dependent oxidoreductase, at 115,296 to 116,339 _RS00535 ABID97_RS00540: ABID97_RS00540 - HAMP domain-containing sensor histidine kinase, at 116,446 to 117,840 _RS00540 ABID97_RS00545: ABID97_RS00545 - response regulator transcription factor, at 117,837 to 118,538 _RS00545 ABID97_RS00550: ABID97_RS00550 - DUF4260 domain-containing protein, at 118,648 to 119,028 _RS00550 ABID97_RS00555: ABID97_RS00555 - Spy/CpxP family protein refolding chaperone, at 119,141 to 119,608 _RS00555
Group Condition ABID97_RS00535 ABID97_RS00540 ABID97_RS00545 ABID97_RS00550 ABID97_RS00555
carbon source D-Glucuronic Acid (C) -0.2 -2.2 +0.1 -0.2 N.D.
carbon source D,L-Malic Acid (C) -0.2 -1.5 -0.2 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -1.6 -0.1 -0.1 N.D.
carbon source propionate (C) -0.3 -1.4 -0.0 -0.1 N.D.
carbon source L-Threonine (C) -0.1 -1.3 +0.0 -0.1 N.D.
carbon source L-tyrosine (C) -0.2 -1.1 -0.1 -0.0 N.D.
carbon source propionate (C) -0.1 -1.7 +0.2 +0.1 N.D.
carbon source L-Threonine (C) -0.1 -1.1 +0.0 -0.2 N.D.
carbon source D-Xylose (C) -0.1 -1.2 +0.0 +0.0 N.D.
carbon source L-Fucose (C) -0.2 -0.8 -0.4 +0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.8 -0.3 -0.1 N.D.
carbon source D-Glucose (C) -0.2 -0.5 -0.3 -0.1 N.D.
carbon source acetate (C) -0.2 -0.1 -0.3 -0.4 N.D.
carbon source L-Fucose (C) -0.1 -0.8 -0.1 -0.0 N.D.
carbon source Ethanol (C) -0.0 -0.8 -0.2 +0.0 N.D.
carbon source D-Serine (C) -0.2 -0.6 -0.3 +0.0 N.D.
carbon source L-Tryptophan (C) -0.0 -0.7 -0.1 -0.1 N.D.
carbon source L-Histidine (C) -0.1 -1.0 +0.1 +0.0 N.D.
carbon source D-Arabinose (C) -0.2 -0.6 -0.1 -0.0 N.D.
carbon source Glycolic Acid (C) -0.1 -0.3 -0.3 -0.2 N.D.
carbon source D-Xylose (C) -0.1 -1.2 +0.3 +0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.8 +0.0 +0.0 N.D.
carbon source Ethanol (C) -0.2 -0.7 +0.1 -0.0 N.D.
carbon source L-Arabinose (C) -0.3 -0.3 -0.1 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.0 -1.2 +0.2 +0.1 N.D.
carbon source L-Alanine (C) -0.3 -0.7 +0.0 +0.2 N.D.
carbon source D-Glucose (C) -0.0 -0.7 +0.1 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.8 +0.1 -0.0 N.D.
carbon source L-Tryptophan (C) +0.0 -0.7 -0.2 +0.1 N.D.
carbon source L-Alanine (C) -0.1 -0.7 +0.3 +0.2 N.D.
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