Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS00340 and ABID97_RS00345 are separated by 5 nucleotidesABID97_RS00345 and ABID97_RS00350 are separated by 21 nucleotidesABID97_RS00350 and ABID97_RS00355 are separated by 46 nucleotidesABID97_RS00355 and ABID97_RS00360 are separated by 46 nucleotides ABID97_RS00340: ABID97_RS00340 - DUF2946 family protein, at 78,098 to 78,646 _RS00340 ABID97_RS00345: ABID97_RS00345 - alpha/beta fold hydrolase, at 78,652 to 79,662 _RS00345 ABID97_RS00350: ABID97_RS00350 - nuclear transport factor 2 family protein, at 79,684 to 80,136 _RS00350 ABID97_RS00355: ABID97_RS00355 - hypothetical protein, at 80,183 to 80,959 _RS00355 ABID97_RS00360: ABID97_RS00360 - LemA family protein, at 81,006 to 81,608 _RS00360
Group Condition ABID97_RS00340 ABID97_RS00345 ABID97_RS00350 ABID97_RS00355 ABID97_RS00360
carbon source butyrate (C) -2.2 -0.0 +0.2 -0.3 -1.1
carbon source butyrate (C) -2.1 -0.2 +0.2 -0.3 +0.3
carbon source Adenine (C) -1.3 -0.2 +0.0 +0.0 -0.4
carbon source D-Mannose (C) -1.6 -0.2 +0.3 -0.0 -0.3
carbon source L-Arabinose (C) +0.0 -0.3 +0.2 -1.0 -0.6
carbon source D-Mannose (C) -1.4 -0.0 +0.2 -0.1 -0.2
carbon source Adenine (C) -1.1 -0.2 +0.2 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.1 -0.0 -0.7 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.1 -0.2 -0.2 -0.4
carbon source L-Tryptophan (C) -0.3 -0.1 +0.1 -0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.0 +0.1 -0.4 -0.8
carbon source L-tyrosine (C) -0.1 -0.4 +0.1 -0.4 -0.2
carbon source L-Fucose (C) -0.1 -0.2 -0.1 -0.5 +0.1
carbon source L-Alanine (C) -0.0 -0.2 +0.3 -0.5 -0.3
carbon source Formate (C) -0.4 -0.1 +0.2 -0.3 -0.2
phage V2_100 -0.2 +0.2 -0.4 +0.2 -0.4
carbon source Glycerol (C) -0.3 -0.2 +0.2 -0.3 -0.1
carbon source D-Serine (C) -0.0 -0.2 +0.3 -0.2 -0.4
carbon source L-Histidine (C) +0.1 -0.2 +0.4 -0.5 -0.3
carbon source D-Xylose (C) -0.3 +0.0 +0.4 -0.4 -0.2
carbon source D,L-Malic Acid (C) +0.2 +0.0 -0.1 +0.1 -0.6
carbon source D-Gluconic Acid (C) -0.1 +0.1 +0.5 -0.6 -0.3
plant outgrowth control Plant outgrowth control +0.0 -0.1 +0.3 -0.4 -0.2
carbon source L-tyrosine (C) +0.1 -0.1 +0.1 -0.6 +0.2
carbon source Glycolic Acid (C) -0.3 -0.2 +0.1 +0.2 -0.1
carbon source D-Glucose (C) -0.1 -0.4 +0.5 -0.2 -0.1
carbon source L-Histidine (C) +0.0 -0.1 +0.4 +0.0 -0.5
carbon source Glucuronamide (C) -0.7 -0.2 +0.2 +0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 +0.3 -0.1 -0.2
carbon source D-Glucose (C) -0.0 -0.1 +0.7 +0.0 -0.3
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ABID97_RS00340
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