Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS00125 and ABID97_RS00130 are separated by 62 nucleotidesABID97_RS00130 and ABID97_RS00135 are separated by 120 nucleotidesABID97_RS00135 and ABID97_RS00140 are separated by 19 nucleotidesABID97_RS00140 and ABID97_RS00145 are separated by 86 nucleotides ABID97_RS00125: ABID97_RS00125 - TetR/AcrR family transcriptional regulator, at 29,446 to 30,132 _RS00125 ABID97_RS00130: ABID97_RS00130 - branched-chain amino acid ABC transporter substrate-binding protein, at 30,195 to 31,460 _RS00130 ABID97_RS00135: ABID97_RS00135 - cytochrome P450, at 31,581 to 34,805 _RS00135 ABID97_RS00140: ABID97_RS00140 - alpha/beta hydrolase, at 34,825 to 35,598 _RS00140 ABID97_RS00145: ABID97_RS00145 - TetR/AcrR family transcriptional regulator, at 35,685 to 36,320 _RS00145
Group Condition ABID97_RS00125 ABID97_RS00130 ABID97_RS00135 ABID97_RS00140 ABID97_RS00145
carbon source L-Alanine (C) -0.1 -0.1 -0.1 -0.3 -0.1
carbon source Tween 20 (C) -0.4 -0.1 -0.0 -0.2 -0.1
phage V2_100 -0.3 -0.3 +0.2 +0.0 -0.1
plant outgrowth control Plant outgrowth control +0.1 +0.1 -0.0 -0.2 -0.3
carbon source Gly-Glu (C) -0.2 +0.1 +0.1 -0.1 +0.2
carbon source Glycolic Acid (C) -0.1 -0.2 +0.1 +0.1 +0.2
carbon source L-Glutamine (C) +0.1 +0.2 +0.0 -0.1 -0.2
carbon source L-Histidine (C) -0.1 +0.0 +0.4 -0.3 +0.1
carbon source butyrate (C) +0.2 +0.1 +0.1 -0.1 -0.2
carbon source butyrate (C) +0.4 -0.2 +0.2 -0.2 +0.0
carbon source L-Threonine (C) +0.2 +0.1 +0.2 -0.0 -0.2
carbon source L-tyrosine (C) +0.3 +0.0 -0.0 +0.3 -0.3
carbon source L-Phenylalanine (C) +0.1 -0.1 +0.1 -0.1 +0.2
carbon source acetate (C) -0.0 +0.3 -0.0 -0.2 +0.3
carbon source L-Asparagine (C) +0.1 -0.2 +0.0 +0.1 +0.4
carbon source D-Serine (C) +0.1 -0.1 +0.2 +0.0 +0.2
carbon source Glycerol (C) -0.1 +0.2 +0.1 -0.0 +0.2
carbon source Adenine (C) +0.1 +0.1 -0.1 +0.4 -0.1
carbon source Fumarate (C) -0.2 +0.2 +0.1 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 -0.2 +0.2 +0.0
carbon source L-Tryptophan (C) +0.1 +0.3 +0.1 +0.2 -0.2
carbon source propionate (C) -0.1 +0.4 +0.2 +0.0 +0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.3 +0.0 +0.2 +0.1
carbon source D-Glucose (C) +0.2 +0.1 +0.1 +0.1 +0.1
carbon source Glucuronamide (C) -0.1 +0.2 -0.0 +0.2 +0.3
carbon source D-Mannose (C) +0.2 +0.3 +0.2 +0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.1 +0.0 +0.0 +0.4
carbon source L-Arabinose (C) -0.2 +0.3 +0.1 +0.2 +0.4
carbon source propionate (C) +0.7 -0.0 +0.3 -0.1 -0.1
carbon source Formate (C) +0.4 +0.2 +0.1 +0.1 +0.1
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ABID97_RS00125
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