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Protein
Homologs
Fitness for 5 genes in
Phocaeicola dorei CL03T12C01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABI39_RS21300 and ABI39_RS21305 are separated by 94 nucleotides
ABI39_RS21305 and ABI39_RS21310 are separated by 16 nucleotides
ABI39_RS21310 and ABI39_RS21315 are separated by 26 nucleotides
ABI39_RS21315 and ABI39_RS21320 overlap by 4 nucleotides
ABI39_RS21300: ABI39_RS21300 - cyclically-permuted mutarotase family protein, at 5,249,195 to 5,250,322
_RS21300
ABI39_RS21305: ABI39_RS21305 - family 20 glycosylhydrolase, at 5,250,417 to 5,252,741
_RS21305
ABI39_RS21310: ABI39_RS21310 - glycoside hydrolase family 2 protein, at 5,252,758 to 5,255,325
_RS21310
ABI39_RS21315: ABI39_RS21315 - sialate O-acetylesterase, at 5,255,352 to 5,257,415
_RS21315
ABI39_RS21320: ABI39_RS21320 - sialate O-acetylesterase, at 5,257,412 to 5,258,077
_RS21320
Group
Condition
ABI39
_RS21300
ABI39
_RS21305
ABI39
_RS21310
ABI39
_RS21315
ABI39
_RS21320
carbon source
N-acetylneuraminic (C)
-5.0
-0.5
-0.2
+0.2
-0.0
carbon source
N-acetylneuraminic (C)
-4.6
-0.5
-0.1
-0.1
-0.1
carbon source
Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
-1.4
+0.2
-0.0
+0.1
-1.0
carbon source
Amylopectin from Potato (C)
-0.6
-0.1
-0.2
-0.3
-0.5
carbon source
Xylan from Beechwood; autoclaved 2.5 mg/ml (C)
-0.5
+0.2
-0.3
-0.1
-0.4
carbon source
Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
-0.6
-0.3
-0.4
+0.0
+0.1
carbon source
Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
-0.3
-0.4
-0.2
-0.2
-0.1
carbon source
Pectic galactan from potato; filtered 2.5 mg/ml (C)
-0.4
-0.3
-0.1
-0.2
-0.0
carbon source
amylopectin from maize; autoclaved 2.5 mg/ml (C)
-0.2
+0.1
-0.0
-0.2
-0.6
carbon source
Galactan from Potato; autoclaved 2.5 mg/ml (C)
-0.6
-0.3
-0.1
-0.3
+0.3
carbon source
amylopectin from maize (C)
-0.0
+0.3
-0.3
-0.1
-0.7
carbon source
Pectic galactan from potato; filtered 2.5 mg/ml (C)
-0.4
-0.1
-0.1
-0.3
+0.1
carbon source
b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
-0.1
+0.2
-0.1
-0.5
-0.4
carbon source
Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
-0.6
-0.6
-0.2
+0.2
+0.2
carbon source
amylopectin from maize; autoclaved 2.5 mg/ml (C)
-0.4
+0.2
-0.0
-0.1
-0.5
carbon source
Glycogen; filtered 2.5 mg/ml (C)
-0.0
+0.3
-0.1
-0.6
-0.4
carbon source
Glycogen; autoclaved 2.5 mg/ml (C)
-0.2
+0.3
-0.2
-0.2
-0.4
carbon source
Galactan from Potato (C)
-0.5
-0.3
+0.2
+0.2
-0.2
carbon source
Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
-0.6
+0.2
+0.0
+0.0
-0.2
carbon source
polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
-0.3
-0.1
-0.1
+0.2
-0.3
carbon source
Galactan from Potato; filtered 2.5 mg/ml (C)
-0.7
-0.1
-0.1
+0.2
+0.2
carbon source
Galactan from Potato (C)
-0.1
-0.4
+0.1
-0.2
+0.2
carbon source
Glycogen; autoclaved 2.5 mg/ml (C)
+0.1
+0.2
-0.2
-0.2
-0.2
carbon source
Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)
-0.5
-0.0
-0.3
+0.3
+0.3
carbon source
polygalacturonic; autoclaved 2.5 mg/ml (C)
+0.3
+0.1
-0.2
-0.4
+0.0
carbon source
b-Glucan from Beet (1,2-b-Glucan) (C)
+0.5
+0.3
-0.0
-0.2
+0.1
carbon source
b-Glucan from Beet (1,2-b-Glucan) (C)
+0.5
+0.2
-0.1
+0.3
-0.1
carbon source
Mucin from porcine stomach type III (C)
+0.5
+0.3
+0.0
+0.1
-0.1
carbon source
Beta-Lactose 2.5 mg/ml (C)
-0.1
-0.3
+0.1
+0.6
+0.5
carbon source
Beta-Lactose 2.5 mg/ml (C)
+0.1
-0.3
+0.3
+0.7
+0.9
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