Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS21110 and ABI39_RS21115 are separated by 179 nucleotidesABI39_RS21115 and ABI39_RS21120 are separated by 238 nucleotidesABI39_RS21120 and ABI39_RS21125 are separated by 171 nucleotidesABI39_RS21125 and ABI39_RS21130 are separated by 6 nucleotides ABI39_RS21110: ABI39_RS21110 - A/G-specific adenine glycosylase, at 5,195,777 to 5,196,835 _RS21110 ABI39_RS21115: ABI39_RS21115 - integration host factor subunit beta, at 5,197,015 to 5,197,290 _RS21115 ABI39_RS21120: ABI39_RS21120 - Rne/Rng family ribonuclease, at 5,197,529 to 5,199,103 _RS21120 ABI39_RS21125: ABI39_RS21125 - N-acetylmuramoyl-L-alanine amidase, at 5,199,275 to 5,200,081 _RS21125 ABI39_RS21130: ABI39_RS21130 - TlpA family protein disulfide reductase, at 5,200,088 to 5,200,630 _RS21130
Group Condition ABI39_RS21110 ABI39_RS21115 ABI39_RS21120 ABI39_RS21125 ABI39_RS21130
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.1 N.D. N.D. -0.1 -0.9
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.0 N.D. N.D. +0.0 -0.9
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.0 N.D. N.D. -0.4 -0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 N.D. N.D. -0.2 -0.2
carbon source Fructose-6-phosphate (C) +0.1 N.D. N.D. -0.1 -0.6
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.2 N.D. N.D. -0.0 -0.6
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.1 N.D. N.D. +0.1 -0.5
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.1 N.D. N.D. +0.2 -0.4
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.3 N.D. N.D. -0.2 -0.4
carbon source D-Mannose (C) +0.2 N.D. N.D. +0.1 -0.4
carbon source a-Cyclodextrin (C) +0.2 N.D. N.D. +0.1 -0.3
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.3 N.D. N.D. -0.0 +0.3
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.3 N.D. N.D. -0.3 -0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.4 N.D. N.D. +0.2 +0.1
carbon source amylopectin from maize (C) +0.2 N.D. N.D. -0.3 +0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 N.D. N.D. -0.2 +0.3
carbon source Beta-Lactose 2.5 mg/ml (C) +0.1 N.D. N.D. -0.1 +0.5
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) -0.1 N.D. N.D. +0.3 +0.3
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.0 N.D. N.D. -0.0 +0.6
carbon source D-Fructose 2.5 mg/ml (C) +0.2 N.D. N.D. +0.2 +0.2
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.1 N.D. N.D. +0.1 +0.4
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.0 N.D. N.D. -0.1 +0.7
carbon source D-Glucose 2.5 mg/ml (C) +0.3 N.D. N.D. +0.3 +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 N.D. N.D. +0.2 +0.4
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.2 N.D. N.D. +0.1 +0.4
carbon source D-Mannose 2.5 mg/ml (C) +0.1 N.D. N.D. +0.1 +0.5
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.1 N.D. N.D. +0.2 +0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 N.D. N.D. +0.2 +0.5
carbon source D-Fructose 2.5 mg/ml (C) +0.2 N.D. N.D. +0.2 +0.5
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.1 N.D. N.D. +0.2 +0.7
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