Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS20925 and ABI39_RS20930 are separated by 80 nucleotidesABI39_RS20930 and ABI39_RS20935 are separated by 73 nucleotidesABI39_RS20935 and ABI39_RS20940 are separated by 23 nucleotidesABI39_RS20940 and ABI39_RS20945 are separated by 205 nucleotides ABI39_RS20925: ABI39_RS20925 - threonine--tRNA ligase, at 5,151,139 to 5,153,079 _RS20925 ABI39_RS20930: ABI39_RS20930 - tetratricopeptide repeat protein, at 5,153,160 to 5,155,168 _RS20930 ABI39_RS20935: ABI39_RS20935 - peptide deformylase, at 5,155,242 to 5,155,796 _RS20935 ABI39_RS20940: ABI39_RS20940 - Holliday junction resolvase RuvX, at 5,155,820 to 5,156,239 _RS20940 ABI39_RS20945: ABI39_RS20945 - hypothetical protein, at 5,156,445 to 5,157,682 _RS20945
Group Condition ABI39_RS20925 ABI39_RS20930 ABI39_RS20935 ABI39_RS20940 ABI39_RS20945
carbon source Amylopectin from Potato (C) N.D. -4.9 N.D. N.D. +0.0
carbon source Amylopectin from Potato (C) N.D. -4.7 N.D. N.D. +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. -3.8 N.D. N.D. +0.1
carbon source amylopectin from maize (C) N.D. -3.9 N.D. N.D. +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -3.8 N.D. N.D. +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -3.7 N.D. N.D. +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -3.3 N.D. N.D. -0.1
carbon source amylopectin from maize (C) N.D. -3.7 N.D. N.D. +0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. -3.4 N.D. N.D. +0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -3.1 N.D. N.D. -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -2.9 N.D. N.D. -0.3
carbon source B-glucan from yeast (C) N.D. -3.2 N.D. N.D. +0.1
carbon source B-glucan from yeast (C) N.D. -3.1 N.D. N.D. +0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. -3.0 N.D. N.D. +0.0
carbon source Starch from potato (C) N.D. -2.9 N.D. N.D. -0.1
carbon source Starch from potato (C) N.D. -3.0 N.D. N.D. +0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. -2.7 N.D. N.D. -0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. -3.0 N.D. N.D. +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -3.1 N.D. N.D. +0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. -2.9 N.D. N.D. +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. -2.7 N.D. N.D. +0.0
carbon source a-Cyclodextrin (C) N.D. -2.7 N.D. N.D. +0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -2.6 N.D. N.D. +0.1
carbon source a-Cyclodextrin (C) N.D. -2.5 N.D. N.D. +0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -2.3 N.D. N.D. +0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -2.3 N.D. N.D. +0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -2.5 N.D. N.D. +0.3
carbon source beta-Cyclodextrin 2.5 mg/ml (C) N.D. -2.3 N.D. N.D. +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -2.4 N.D. N.D. +0.3
carbon source Galactan from Potato (C) N.D. -2.0 N.D. N.D. +0.3
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