Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS20525 and ABI39_RS20530 are separated by 13 nucleotidesABI39_RS20530 and ABI39_RS20535 overlap by 14 nucleotidesABI39_RS20535 and ABI39_RS20540 are separated by 613 nucleotidesABI39_RS20540 and ABI39_RS20545 are separated by 20 nucleotides ABI39_RS20525: ABI39_RS20525 - ABC transporter ATP-binding protein, at 5,061,951 to 5,063,222 _RS20525 ABI39_RS20530: ABI39_RS20530 - ABC transporter permease, at 5,063,236 to 5,064,099 _RS20530 ABI39_RS20535: ABI39_RS20535 - glycosyltransferase, at 5,064,086 to 5,065,267 _RS20535 ABI39_RS20540: ABI39_RS20540 - glycosyltransferase family 2 protein, at 5,065,881 to 5,066,831 _RS20540 ABI39_RS20545: ABI39_RS20545 - glycosyltransferase family 2 protein, at 5,066,852 to 5,067,877 _RS20545
Group Condition ABI39_RS20525 ABI39_RS20530 ABI39_RS20535 ABI39_RS20540 ABI39_RS20545
carbon source Galactan from Potato (C) -0.2 -0.1 -0.2 -0.3 -0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 -0.4 -0.5 +0.0 -0.2
carbon source Galactan from Potato (C) -0.2 -0.1 -0.4 +0.0 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.0 -0.1 -0.4 -0.2 -0.3
carbon source beta-Cyclodextrin (C) -0.2 -0.3 -0.2 +0.1 -0.2
carbon source B-glucan from yeast (C) -0.1 -0.3 -0.2 +0.1 -0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 -0.2 -0.4 -0.1 -0.3
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.1 -0.2 -0.2 +0.2 -0.3
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.2 -0.1 -0.3 +0.3 -0.3
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.1 -0.3 -0.3 +0.2 -0.3
carbon source D-Mannose 2.5 mg/ml (C) -0.3 -0.3 -0.2 +0.2 +0.0
carbon source amylopectin from maize (C) -0.3 -0.2 +0.1 +0.3 -0.4
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.0 +0.1 -0.2 +0.1 -0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.1 -0.7 +0.2 +0.2 +0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.2 -0.5 -0.1 +0.3 +0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.1 -0.1 +0.1 -0.3
carbon source D-Mannose (C) -0.1 +0.2 +0.2 +0.1 -0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.1 +0.6 -0.1 -0.0 -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.0 +0.4 +0.2 +0.1 -0.4
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 +0.4 +0.1 +0.3 -0.3
carbon source amylopectin from maize (C) -0.3 -0.1 +0.2 +0.5 +0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.3 +0.3 -0.2 +0.4 +0.2
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +0.1 +0.2 +0.3 +0.1 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.2 +0.3 +0.0 +0.4 -0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.2 +0.2 +0.3 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.0 +0.7 +0.2 -0.0 -0.2
carbon source Inulin from chicory; autoclaved 2.5 mg/ml (C) +0.1 +0.5 -0.2 +0.2 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 +0.5 -0.2 +0.2 +0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.1 +0.2 +0.3 -0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.2 +0.3 +0.1 +0.3 +0.1
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