Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS23240 and ABI39_RS20250 are separated by 168 nucleotidesABI39_RS20250 and ABI39_RS20255 are separated by 65 nucleotidesABI39_RS20255 and ABI39_RS20265 are separated by 136 nucleotidesABI39_RS20265 and ABI39_RS20270 are separated by 27 nucleotides ABI39_RS23240: ABI39_RS23240 - hypothetical protein, at 5,001,769 to 5,001,978 _RS23240 ABI39_RS20250: ABI39_RS20250 - hypothetical protein, at 5,002,147 to 5,002,368 _RS20250 ABI39_RS20255: ABI39_RS20255 - YjbH domain-containing protein, at 5,002,434 to 5,003,255 _RS20255 ABI39_RS20265: ABI39_RS20265 - WecB/TagA/CpsF family glycosyltransferase, at 5,003,392 to 5,004,141 _RS20265 ABI39_RS20270: ABI39_RS20270 - NAD(P)-binding protein, at 5,004,169 to 5,005,416 _RS20270
Group Condition ABI39_RS23240 ABI39_RS20250 ABI39_RS20255 ABI39_RS20265 ABI39_RS20270
carbon source Amylopectin from Potato (C) N.D. +0.2 -0.3 -1.2 -0.6
carbon source Amylopectin from Potato (C) N.D. +0.4 -0.2 -1.5 -0.5
carbon source amylopectin from maize (C) N.D. -0.2 -0.2 -0.8 -0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.1 -0.0 -0.8 -0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.0 +0.3 -1.0 -0.6
carbon source B-glucan from yeast (C) N.D. -0.1 -0.2 -0.8 -0.1
carbon source beta-Cyclodextrin (C) N.D. -0.1 -0.1 -0.8 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. -0.5 +0.4 -0.6 -0.4
carbon source a-Cyclodextrin (C) N.D. -0.0 +0.1 -0.8 -0.3
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) N.D. -0.6 +0.4 -0.4 -0.3
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -0.6 +0.1 -0.3 -0.2
carbon source Glycogen; filtered 2.5 mg/ml (C) N.D. -0.4 +0.1 -0.7 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.1 +0.3 -0.6 -0.4
carbon source amylopectin from maize (C) N.D. +0.4 +0.2 -1.0 -0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.2 +0.4 -0.5 -0.7
carbon source Galactan from Potato (C) N.D. +0.5 +0.4 -0.9 -0.4
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) N.D. -0.3 +0.7 -0.2 -0.1
carbon source Galactan from Potato (C) N.D. +0.7 +0.5 -0.6 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. +0.6 -0.1 -0.6 +0.4
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. -0.4 +0.5 +0.5 -0.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. -0.1 -0.0 +1.1 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.3 +0.6 +0.3
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. -0.1 -0.0 +1.0 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.1 +0.7 +0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. +0.4 +0.3 +1.0 +0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. -0.3 +0.3 +1.6 +0.5
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. -0.1 +0.0 +1.8 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. +0.2 +0.4 +1.1 +0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. +0.1 +0.3 +1.8 +0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. +0.3 +0.4 +1.4 +0.7
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ABI39_RS23240
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ABI39_RS20250
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ABI39_RS20270
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