Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS18820 and ABI39_RS18825 are separated by 183 nucleotidesABI39_RS18825 and ABI39_RS18830 are separated by 314 nucleotidesABI39_RS18830 and ABI39_RS18835 are separated by 42 nucleotidesABI39_RS18835 and ABI39_RS18840 are separated by 193 nucleotides ABI39_RS18820: ABI39_RS18820 - EamA family transporter, at 4,744,321 to 4,745,241 _RS18820 ABI39_RS18825: ABI39_RS18825 - phospho-sugar mutase, at 4,745,425 to 4,747,170 _RS18825 ABI39_RS18830: ABI39_RS18830 - C69 family dipeptidase, at 4,747,485 to 4,749,125 _RS18830 ABI39_RS18835: ABI39_RS18835 - M23 family metallopeptidase, at 4,749,168 to 4,750,838 _RS18835 ABI39_RS18840: ABI39_RS18840 - alanine dehydrogenase, at 4,751,032 to 4,752,123 _RS18840
Group Condition ABI39_RS18820 ABI39_RS18825 ABI39_RS18830 ABI39_RS18835 ABI39_RS18840
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.7 N.D. -1.5 -0.8 -0.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.9 N.D. -1.3 -0.6 +0.0
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 N.D. -1.8 -0.7 +0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.9 N.D. -1.0 -0.8 +0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.2 N.D. -0.7 -0.5 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.0 N.D. -0.8 -0.7 +0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.1 N.D. -1.3 -0.8 +0.1
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -0.1 N.D. -1.2 -0.7 +0.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.0 N.D. -1.4 -0.7 +0.1
carbon source Amylopectin from Potato (C) -0.1 N.D. -0.8 -0.6 -0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 N.D. -1.1 -1.0 +0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 N.D. -0.7 -0.8 -0.1
carbon source amylopectin from maize (C) -0.3 N.D. -0.6 -0.2 -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.1 N.D. -0.7 -0.8 +0.1
carbon source Amylopectin from Potato (C) -0.3 N.D. -0.9 -0.5 +0.2
carbon source polygalacturonic (ultrapure) (C) +0.0 N.D. -0.8 -0.7 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.5 N.D. -0.2 -0.5 -0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 N.D. -0.8 -0.5 +0.0
carbon source Starch from potato (C) -0.0 N.D. -0.9 -0.5 +0.0
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.3 N.D. -0.5 -0.4 -0.1
carbon source B-glucan from yeast (C) -0.1 N.D. -0.6 -0.4 -0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.2 N.D. -0.7 -0.2 -0.2
carbon source polygalacturonic (ultrapure) (C) +0.0 N.D. -0.7 -0.6 +0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.1 N.D. -0.7 -0.5 -0.0
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.4 N.D. -0.5 -0.4 +0.1
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -0.1 N.D. -0.9 -0.3 +0.2
carbon source a-Cyclodextrin (C) +0.1 N.D. -0.6 -0.4 +0.2
carbon source Starch from potato (C) +0.3 N.D. -0.7 -0.2 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.5 N.D. -0.8 -0.2 +0.3
carbon source Galactan from Potato (C) +0.8 N.D. +0.2 +0.3 -0.2
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