Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS18240 and ABI39_RS18245 are separated by 29 nucleotidesABI39_RS18245 and ABI39_RS18250 are separated by 14 nucleotidesABI39_RS18250 and ABI39_RS18255 are separated by 12 nucleotidesABI39_RS18255 and ABI39_RS18260 overlap by 4 nucleotides ABI39_RS18240: ABI39_RS18240 - thioredoxin-disulfide reductase, at 4,599,365 to 4,600,312 _RS18240 ABI39_RS18245: ABI39_RS18245 - insulinase family protein, at 4,600,342 to 4,603,161 _RS18245 ABI39_RS18250: ABI39_RS18250 - hypothetical protein, at 4,603,176 to 4,604,663 _RS18250 ABI39_RS18255: ABI39_RS18255 - ABC transporter ATP-binding protein, at 4,604,676 to 4,605,383 _RS18255 ABI39_RS18260: ABI39_RS18260 - C40 family peptidase, at 4,605,380 to 4,605,892 _RS18260
Group Condition ABI39_RS18240 ABI39_RS18245 ABI39_RS18250 ABI39_RS18255 ABI39_RS18260
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.6 -0.4 -0.7 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.6 -0.5 -0.3 -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -0.4 -0.2 -0.8 -0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. +0.0 -0.6 +0.4 -1.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.5 -0.1 -0.3 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. -0.2 -0.2 +0.1 -0.9
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.4 -0.2 -0.1 -0.5
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. -0.1 -0.1 -0.4 -0.3
carbon source B-glucan from yeast (C) N.D. -0.1 -0.2 -0.6 +0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.0 +0.2 -0.2 -0.4
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.1 +0.1 -0.7
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.2 -0.4 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.4 -0.1 -0.1 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.2 +0.3 -0.3 -0.6
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.3 -0.1 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. +0.2 +0.1 -0.1 -0.4
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. -0.1 +0.4 +0.2 -0.6
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) N.D. +0.2 +0.1 +0.2 -0.6
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.5 +0.2 -0.2 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.4 +0.2 -0.6
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -0.0 +0.5 +0.1 -0.2
carbon source Amylopectin from Potato (C) N.D. -0.3 +0.5 +0.1 +0.2
carbon source Amylopectin from Potato (C) N.D. -0.2 +0.1 +0.3 +0.4
carbon source Galactan from Potato (C) N.D. +0.4 +0.2 -0.1 +0.1
carbon source Galactose 1-phosphate dipotassium salt (C) N.D. +0.1 +0.2 +0.2 +0.3
carbon source Starch from potato (C) N.D. -0.2 +0.3 +0.3 +0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. +0.2 +0.2 +0.3 +0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. +0.7 -0.0 +0.4 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. +0.6 +0.4 +0.1 +0.3
carbon source Galactan from Potato (C) N.D. +0.9 +0.3 +0.6 +0.1
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