Fitness for 5 genes in Phocaeicola dorei CL03T12C01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 158 experiments or choose conditions or try the comparative fitness browser

500 ntABI39_RS18175 and ABI39_RS18180 are separated by 185 nucleotidesABI39_RS18180 and ABI39_RS18185 are separated by 125 nucleotidesABI39_RS18185 and ABI39_RS18190 are separated by 6 nucleotidesABI39_RS18190 and ABI39_RS18195 are separated by 140 nucleotides ABI39_RS18175: ABI39_RS18175 - sigma-70 family RNA polymerase sigma factor, at 4,583,637 to 4,584,107 _RS18175 ABI39_RS18180: ABI39_RS18180 - galactose mutarotase, at 4,584,293 to 4,585,426 _RS18180 ABI39_RS18185: ABI39_RS18185 - DUF3857 domain-containing protein, at 4,585,552 to 4,587,111 _RS18185 ABI39_RS18190: ABI39_RS18190 - DUF3857 and transglutaminase domain-containing protein, at 4,587,118 to 4,589,073 _RS18190 ABI39_RS18195: ABI39_RS18195 - sigma-70 family RNA polymerase sigma factor, at 4,589,214 to 4,589,759 _RS18195
Group Condition ABI39_RS18175 ABI39_RS18180 ABI39_RS18185 ABI39_RS18190 ABI39_RS18195
carbon source amylopectin from maize (C) -0.2 -0.1 +0.2 -0.1 -1.0
carbon source D-Fructose 2.5 mg/ml (C) -0.1 -0.1 -0.3 -0.2 -0.3
carbon source D-Glucose 2.5 mg/ml (C) -0.0 +0.0 -0.2 -0.3 -0.4
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.6 -0.3 -0.2 -0.1 +0.2
carbon source beta-Cyclodextrin (C) -0.3 -0.2 +0.2 -0.1 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.4 +0.5 -0.2 -0.1 -0.5
carbon source beta-Cyclodextrin (C) -0.2 -0.1 +0.2 -0.1 -0.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.1 +0.2 -0.0 +0.1 +0.2
carbon source amylopectin from maize (C) -0.2 -0.0 +0.2 +0.1 -0.6
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.2 +0.4 -0.0 +0.0 -0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 +0.0 +0.1 +0.1 +0.3
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.3 +0.2 -0.1 +0.1 +0.3
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.1 +0.5 -0.0 -0.0 -0.4
carbon source Amylopectin from Potato (C) -0.5 +0.3 +0.3 +0.1 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 +0.5 -0.3 -0.3 -0.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 +0.6 -0.1 -0.3 +0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.4 +0.1 +0.1 -0.0 -0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.3 +0.8 -0.2 -0.3 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.6 +0.5 -0.0 -0.4 -0.1
carbon source Beta-Lactose 2.5 mg/ml (C) +0.2 +0.2 +0.2 +0.2 -0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.2 +0.0 +0.0 +0.6
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.6 -0.1 +0.2 -0.0 +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.4 +0.4 -0.2 +0.2 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.1 +0.2 +0.4 +0.3 +0.3
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.7 +0.2 +0.1 +0.2 -0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.6 +0.4 +0.3 +0.1 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.4 +0.5 +0.1 +0.1 +0.2
carbon source N-acetylneuraminic (C) +0.3 +0.3 +0.3 +0.1 +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 +0.3 +0.1 -0.0 +0.5
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.3 +0.4 +0.1 +0.1 +0.4
remove
ABI39_RS18175
plot
remove
ABI39_RS18180
plot
remove
ABI39_RS18185
remove
ABI39_RS18190
plot
remove
ABI39_RS18195
plot