Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS17910 and ABI39_RS17915 are separated by 131 nucleotidesABI39_RS17915 and ABI39_RS17920 are separated by 1668 nucleotidesABI39_RS17920 and ABI39_RS17925 overlap by 17 nucleotidesABI39_RS17925 and ABI39_RS17930 are separated by 60 nucleotides ABI39_RS17910: ABI39_RS17910 - tRNA-Ile, at 4,515,069 to 4,515,142 _RS17910 ABI39_RS17915: ABI39_RS17915 - 16S ribosomal RNA, at 4,515,274 to 4,516,805 _RS17915 ABI39_RS17920: ABI39_RS17920 - ABC transporter permease, at 4,518,474 to 4,519,664 _RS17920 ABI39_RS17925: ABI39_RS17925 - ABC transporter permease, at 4,519,648 to 4,520,820 _RS17925 ABI39_RS17930: ABI39_RS17930 - biotin/lipoyl-binding protein, at 4,520,881 to 4,521,876 _RS17930
Group Condition ABI39_RS17910 ABI39_RS17915 ABI39_RS17920 ABI39_RS17925 ABI39_RS17930
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.2 -0.2 -0.5
carbon source D-Fructose 2.5 mg/ml (C) N.D. N.D. -0.2 -0.2 -0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.2 -0.2 -0.3
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 +0.1 -0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 +0.1 -0.2
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. +0.2 +0.2 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. N.D. +0.3 -0.2 +0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. +0.4 +0.2 -0.2
carbon source Galactan from Potato (C) N.D. N.D. +0.1 -0.2 +0.4
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.4 +0.2 -0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.4 +0.1 -0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 -0.1 +0.3
carbon source amylopectin from maize (C) N.D. N.D. +0.2 +0.5 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. N.D. +0.3 +0.3 +0.0
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 +0.2 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 +0.4 +0.1
carbon source beta-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. +0.2 +0.1 +0.3
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. N.D. +0.3 +0.2 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. N.D. -0.3 +0.3 +0.6
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 +0.2 +0.3
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. N.D. +0.3 +0.2 +0.2
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 +0.2 +0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. N.D. +0.2 +0.3 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 +0.3 +0.3
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) N.D. N.D. +0.1 +0.2 +0.5
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) N.D. N.D. +0.1 +0.3 +0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.6 +0.0 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 +0.2 +0.4
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) N.D. N.D. +0.3 +0.2 +0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.5 +0.4 +0.1
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