Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS17275 and ABI39_RS17280 are separated by 101 nucleotidesABI39_RS17280 and ABI39_RS17285 are separated by 9 nucleotidesABI39_RS17285 and ABI39_RS17290 are separated by 61 nucleotidesABI39_RS17290 and ABI39_RS17295 are separated by 54 nucleotides ABI39_RS17275: ABI39_RS17275 - type I restriction enzyme HsdR N-terminal domain-containing protein, at 4,369,459 to 4,369,908 _RS17275 ABI39_RS17280: ABI39_RS17280 - hypothetical protein, at 4,370,010 to 4,370,801 _RS17280 ABI39_RS17285: ABI39_RS17285 - Nif3-like dinuclear metal center hexameric protein, at 4,370,811 to 4,371,905 _RS17285 ABI39_RS17290: ABI39_RS17290 - hypothetical protein, at 4,371,967 to 4,372,245 _RS17290 ABI39_RS17295: ABI39_RS17295 - ABC transporter permease, at 4,372,300 to 4,373,097 _RS17295
Group Condition ABI39_RS17275 ABI39_RS17280 ABI39_RS17285 ABI39_RS17290 ABI39_RS17295
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 N.D. -0.5 -0.4 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.7 N.D. +0.6 -0.9 -0.3
carbon source Glucose-6-Phosphate (C) -0.3 N.D. -0.3 -0.6 +0.1
carbon source amylopectin from maize (C) -0.2 N.D. +0.4 -1.7 +0.4
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.0 N.D. +0.1 -1.2 -0.0
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.3 N.D. +0.2 -0.7 -0.2
carbon source Amylopectin from Potato (C) +0.1 N.D. +0.3 -0.6 -0.8
carbon source Starch from potato (C) -0.2 N.D. +0.1 -0.9 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.5 N.D. -0.0 -0.6 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.0 N.D. +0.3 -0.1 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.7 N.D. +0.5 -0.7 +0.4
carbon source B-glucan from yeast (C) -0.4 N.D. +0.2 -0.7 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.4 N.D. +0.6 -0.4 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.1 N.D. +0.7 -0.2 -0.6
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.5 N.D. +0.7 -0.5 +0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.8 N.D. +0.2 +0.5 +0.2
carbon source Fructose-6-phosphate (C) +1.1 N.D. -0.3 -0.6 -0.1
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.6 N.D. +0.5 +0.5 +0.2
carbon source Galactan from Potato (C) -0.3 N.D. +0.9 -0.2 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 N.D. +0.4 +0.6 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.5 N.D. +0.8 -0.0 +0.4
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.5 N.D. +0.4 +0.7 +0.1
carbon source Fructose-6-phosphate (C) +1.2 N.D. -0.0 -0.3 -0.1
carbon source D-Galactose 2.5 mg/ml (C) +0.4 N.D. +0.3 +0.4 -0.3
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.2 N.D. +0.2 +1.0 -0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.3 N.D. +0.6 +0.5 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.3 N.D. +0.7 +0.9 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +2.4 N.D. -0.1 -0.5 +0.1
carbon source amylopectin from maize (C) +0.7 N.D. +0.5 -0.4 +1.6
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +3.5 N.D. -0.1 -0.1 -0.7
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