Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS16765 and ABI39_RS16770 are separated by 33 nucleotidesABI39_RS16770 and ABI39_RS16775 are separated by 2 nucleotidesABI39_RS16775 and ABI39_RS16780 are separated by 5 nucleotidesABI39_RS16780 and ABI39_RS16785 are separated by 18 nucleotides ABI39_RS16765: ABI39_RS16765 - SDR family oxidoreductase, at 4,255,649 to 4,256,404 _RS16765 ABI39_RS16770: ABI39_RS16770 - acyl carrier protein, at 4,256,438 to 4,256,665 _RS16770 ABI39_RS16775: ABI39_RS16775 - ketoacyl-ACP synthase III, at 4,256,668 to 4,257,747 _RS16775 ABI39_RS16780: ABI39_RS16780 - MBL fold metallo-hydrolase, at 4,257,753 to 4,258,388 _RS16780 ABI39_RS16785: ABI39_RS16785 - AMP-binding protein, at 4,258,407 to 4,259,924 _RS16785
Group Condition ABI39_RS16765 ABI39_RS16770 ABI39_RS16775 ABI39_RS16780 ABI39_RS16785
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.2 -0.9 -0.1 +0.1 -0.1
carbon source amylopectin from maize (C) -0.5 +0.4 -0.0 -0.3 -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.3 -0.3 -0.3 +0.0 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.4 -0.3 +0.1 +0.2 -0.1
carbon source NAG 2.5 mg/ml (C) +0.4 -0.4 -0.4 -0.2 +0.1
carbon source amylopectin from maize (C) -0.6 +0.7 -0.1 -0.2 +0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.4 +0.3 -0.0 +0.3 -0.1
carbon source B-glucan from yeast (C) -0.5 +0.1 +0.3 +0.2 -0.1
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) +0.4 -0.1 -0.1 +0.2 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.1 -0.4 +0.4 +0.4 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.3 +0.4 -0.2 +0.4 -0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.2 -0.6 +0.4 +0.3 +0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.7 -0.1 +0.1 -0.1 -0.2
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) +0.4 +0.4 -0.3 +0.1 -0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.9 +0.7 +0.4 +0.0 +0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.8 -0.3 -0.1 +0.0 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.0 +0.7 -0.2 +0.2 -0.2
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.1 +0.7 -0.2 +0.2 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.5 +0.4 -0.1 -0.1 +0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.5 -0.3 +0.3 -0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.8 +0.3 -0.4 +0.2 -0.2
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.7 -0.1 +0.2 -0.0
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.4 +0.3 +0.3 +0.1 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.6 +0.4 -0.2 +0.2 +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.2 +0.6 +0.2 +0.3 +0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.5 +0.4 +0.1 +0.3 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.2 +0.5 +0.3 +0.1 +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 +0.8 +0.1 +0.1 +0.1
carbon source Galactan from Potato (C) +0.5 +0.5 +0.2 +0.0 +0.0
carbon source Galactose 1-phosphate dipotassium salt (C) +0.2 +0.8 +0.0 +0.2 +0.1
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