Fitness for 5 genes in Phocaeicola dorei CL03T12C01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 158 experiments or choose conditions or try the comparative fitness browser

500 ntABI39_RS16630 and ABI39_RS16635 are separated by 238 nucleotidesABI39_RS16635 and ABI39_RS16640 are separated by 121 nucleotidesABI39_RS16640 and ABI39_RS16645 are separated by 27 nucleotidesABI39_RS16645 and ABI39_RS16650 are separated by 17 nucleotides ABI39_RS16630: ABI39_RS16630 - multidrug effflux MFS transporter, at 4,225,996 to 4,227,180 _RS16630 ABI39_RS16635: ABI39_RS16635 - AraC family transcriptional regulator, at 4,227,419 to 4,228,270 _RS16635 ABI39_RS16640: ABI39_RS16640 - DUF4251 domain-containing protein, at 4,228,392 to 4,228,985 _RS16640 ABI39_RS16645: ABI39_RS16645 - hypothetical protein, at 4,229,013 to 4,229,231 _RS16645 ABI39_RS16650: ABI39_RS16650 - efflux RND transporter permease subunit, at 4,229,249 to 4,229,794 _RS16650
Group Condition ABI39_RS16630 ABI39_RS16635 ABI39_RS16640 ABI39_RS16645 ABI39_RS16650
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.2 +0.3 -2.5 N.D. +0.4
carbon source amylopectin from maize (C) -0.1 +0.1 -0.4 N.D. -1.3
carbon source N-acetylneuraminic (C) -0.1 -0.1 -1.0 N.D. -0.1
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.1 +0.1 -0.9 N.D. +0.6
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.3 +0.3 -0.8 N.D. +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.6 +0.3 -1.1 N.D. +0.2
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.5 +0.2 -0.5 N.D. -0.2
carbon source D-Glucose 2.5 mg/ml (C) -0.1 +0.3 -0.6 N.D. +0.5
carbon source Amylopectin from Potato (C) +0.7 +0.1 -0.7 N.D. -0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.2 +0.3 -0.9 N.D. +0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.4 +0.3 -1.0 N.D. +0.4
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +0.0 +0.2 -0.6 N.D. +0.6
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.2 -0.5 +0.9 N.D. -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.6 -0.1 -0.9 N.D. +0.7
carbon source Beta-Lactose 2.5 mg/ml (C) +0.0 +0.4 -0.6 N.D. +0.6
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.1 +0.2 -0.8 N.D. +1.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.5 -0.8 N.D. +0.6
carbon source NAG 2.5 mg/ml (C) -0.2 +0.3 -0.3 N.D. +0.8
carbon source Beta-Lactose 2.5 mg/ml (C) -0.2 +0.2 -0.2 N.D. +0.9
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.1 +0.2 +1.3 N.D. -0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.1 +0.4 +0.6 N.D. +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.1 +0.2 +0.4 N.D. +0.7
carbon source Galactan from Potato (C) +0.5 -0.0 +0.9 N.D. +0.1
carbon source NAG 2.5 mg/ml (C) +0.2 +0.3 +0.1 N.D. +0.8
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.3 -0.0 N.D. +1.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.2 +0.3 N.D. +0.9
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 +0.3 +1.8 N.D. -0.7
carbon source Galactan from Potato (C) +0.7 +0.1 +1.3 N.D. -0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 +0.7 +0.9 N.D. +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.6 +0.6 +1.7 N.D. -0.5
remove
ABI39_RS16630
plot
remove
ABI39_RS16635
plot
remove
ABI39_RS16640
remove
ABI39_RS16645
plot
remove
ABI39_RS16650
plot