Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS14995 and ABI39_RS15000 are separated by 5 nucleotidesABI39_RS15000 and ABI39_RS15005 are separated by 122 nucleotidesABI39_RS15005 and ABI39_RS15010 are separated by 2 nucleotidesABI39_RS15010 and ABI39_RS15015 are separated by 86 nucleotides ABI39_RS14995: ABI39_RS14995 - F0F1 ATP synthase subunit B, at 3,889,856 to 3,890,356 _RS14995 ABI39_RS15000: ABI39_RS15000 - F0F1 ATP synthase subunit delta, at 3,890,362 to 3,890,919 _RS15000 ABI39_RS15005: ABI39_RS15005 - F0F1 ATP synthase subunit alpha, at 3,891,042 to 3,892,634 _RS15005 ABI39_RS15010: ABI39_RS15010 - F0F1 ATP synthase subunit gamma, at 3,892,637 to 3,893,506 _RS15010 ABI39_RS15015: ABI39_RS15015 - class I SAM-dependent methyltransferase, at 3,893,593 to 3,894,327 _RS15015
Group Condition ABI39_RS14995 ABI39_RS15000 ABI39_RS15005 ABI39_RS15010 ABI39_RS15015
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.3 -2.3 -1.1 -1.6 -0.2
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -2.1 -1.0 -0.9 -1.5 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.5 -1.9 -0.5 -1.3 -0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.8 -1.3 -1.1 -1.0 +0.8
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -2.6 -1.0 -0.1 -0.9 +0.4
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.9 -2.0 -0.7 -1.1 +0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.2 -1.6 -1.2 -0.2 +0.1
carbon source amylopectin from maize (C) -0.4 -0.6 -0.7 -2.2 -0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -1.5 -1.0 -0.3 -1.0 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 -2.4 -0.2 +0.0 -0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.6 -2.1 -0.1 -0.2 -0.3
carbon source B-glucan from yeast (C) +0.5 -0.9 -0.3 -2.4 -0.1
carbon source Glycogen; filtered 2.5 mg/ml (C) -1.1 -0.6 -0.4 -1.6 +0.5
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.2 -2.1 -0.3 -0.1 -0.5
carbon source polygalacturonic (ultrapure) (C) -1.0 -0.5 -0.3 -0.8 -0.5
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.1 -0.9 -0.7 +0.2 -0.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.6 -1.4 -1.3 +0.1 +0.3
carbon source B-glucan from yeast (C) -0.3 -0.4 -0.6 -1.9 +0.4
carbon source amylopectin from maize (C) -1.8 -0.3 +0.0 -1.1 +1.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -1.9 -0.4 +0.3 +0.4 -0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.4 -1.7 -0.4 -0.3 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +1.3 -1.4 -0.2 -0.9 -0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.7 -0.4 +0.2 -0.8 -1.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.7 +0.0 +0.2 -1.5 -0.8
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 -1.3 +0.2 +0.8 -0.8
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.6 -1.7 +0.4 -0.5 +0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.9 +0.7 -0.1 -0.7 +0.7
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) -0.4 -0.8 +0.3 +1.2 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.4 -0.3 +0.7 +1.6 -0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.7 +1.0 +0.4 +0.8 +0.7
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ABI39_RS14995
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