Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS14920 and ABI39_RS14925 are separated by 490 nucleotidesABI39_RS14925 and ABI39_RS14930 are separated by 220 nucleotidesABI39_RS14930 and ABI39_RS14935 are separated by 0 nucleotidesABI39_RS14935 and ABI39_RS14940 are separated by 103 nucleotides ABI39_RS14920: ABI39_RS14920 - arylsulfatase, at 3,873,635 to 3,875,182 _RS14920 ABI39_RS14925: ABI39_RS14925 - NigD-like N-terminal domain-containing protein, at 3,875,673 to 3,876,410 _RS14925 ABI39_RS14930: ABI39_RS14930 - response regulator transcription factor, at 3,876,631 to 3,877,308 _RS14930 ABI39_RS14935: ABI39_RS14935 - HAMP domain-containing histidine kinase, at 3,877,309 to 3,878,595 _RS14935 ABI39_RS14940: ABI39_RS14940 - PepSY-like domain-containing protein, at 3,878,699 to 3,879,136 _RS14940
Group Condition ABI39_RS14920 ABI39_RS14925 ABI39_RS14930 ABI39_RS14935 ABI39_RS14940
carbon source B-glucan from yeast (C) -0.0 -0.1 -0.3 +0.1 -1.2
carbon source Fructose-6-phosphate (C) +0.1 +0.1 -0.1 -0.1 -1.5
carbon source B-glucan from yeast (C) +0.2 -0.0 -0.4 -0.2 -0.9
carbon source Starch from potato (C) +0.1 +0.1 -0.1 +0.1 -1.5
carbon source Amylopectin from Potato (C) +0.0 -0.4 +0.1 +0.1 -0.8
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.2 -0.4 -0.4 +0.1 -0.3
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.2 -0.8 +0.0 +0.3 -0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.0 -0.4 +0.0 +0.5 -0.7
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.4 -0.2 +0.1 -0.4 -0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.5 -0.5 -0.0 -0.1 -0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.6 -0.4 +0.3 -0.1 -0.8
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.5 -0.0 -0.4 +0.2 -0.6
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.7 -0.1 +0.1 -0.2 -0.8
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.1 -0.2 -0.2 +0.6 -0.6
carbon source Galactan from Potato (C) -0.0 -0.4 +0.2 +0.5 -0.4
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.3 -0.6 -0.2 +0.5 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.5 -0.2 -0.3 +0.4 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.0 -0.5 +0.3 +0.7 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.6 +0.3 +0.3 +0.0 -0.6
carbon source amylopectin from maize (C) +0.0 -1.0 +0.4 +0.4 +0.8
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.2 -0.4 +0.0 +0.6 +0.6
carbon source NAG 2.5 mg/ml (C) +0.1 +0.3 +0.3 -0.2 +0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.1 -0.2 +0.1 +0.3 +0.8
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.1 -0.4 +0.3 +0.8 +0.5
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.3 +0.4 -0.3 +0.2 +0.8
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 -0.5 +0.3 +0.8 +0.8
carbon source NAG 2.5 mg/ml (C) +0.0 +0.3 +0.1 +0.2 +0.9
carbon source D-Galactose 2.5 mg/ml (C) +0.2 +0.4 -0.1 +0.3 +0.8
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.2 +0.1 +0.4 +0.4 +1.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 -0.2 +0.8 +0.8 +1.1
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ABI39_RS14920
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