Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS14875 and ABI39_RS14880 overlap by 4 nucleotidesABI39_RS14880 and ABI39_RS14885 overlap by 8 nucleotidesABI39_RS14885 and ABI39_RS14890 are separated by 229 nucleotidesABI39_RS14890 and ABI39_RS14895 are separated by 439 nucleotides ABI39_RS14875: ABI39_RS14875 - hypothetical protein, at 3,861,256 to 3,861,726 _RS14875 ABI39_RS14880: ABI39_RS14880 - GNAT family N-acetyltransferase, at 3,861,723 to 3,862,259 _RS14880 ABI39_RS14885: ABI39_RS14885 - YqgE/AlgH family protein, at 3,862,252 to 3,862,842 _RS14885 ABI39_RS14890: ABI39_RS14890 - tRNA-Asp, at 3,863,072 to 3,863,145 _RS14890 ABI39_RS14895: ABI39_RS14895 - response regulator, at 3,863,585 to 3,867,568 _RS14895
Group Condition ABI39_RS14875 ABI39_RS14880 ABI39_RS14885 ABI39_RS14890 ABI39_RS14895
carbon source Starch from potato (C) +0.4 -0.2 -0.2 -2.6 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +1.0 -1.5 +0.1 -1.7 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.9 -2.3 +0.9 -0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +1.3 -1.5 -0.7 -0.7 -0.5
carbon source Galactan from Potato (C) -0.4 -0.9 +1.2 -2.1 +0.2
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -2.2 +0.7 +0.4 -0.5 -0.0
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -1.1 +0.5 +0.5 -1.5 -0.0
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) +0.5 -0.9 +0.1 -1.2 -0.0
carbon source B-glucan from yeast (C) +0.7 -0.4 +0.1 -1.4 -0.3
carbon source Mannose-6-Phosphate (C) +0.4 -0.6 +0.5 -1.7 +0.0
carbon source Mucin from porcine stomach type III (C) +0.3 -0.7 +0.7 -1.4 -0.1
carbon source Fructose-6-phosphate (C) +0.4 -0.3 +0.4 -1.8 +0.1
carbon source Amylopectin from Potato (C) +1.0 -0.4 -0.8 -0.4 -0.4
carbon source Galactan from Potato (C) +0.3 -0.9 +1.8 -1.7 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -1.1 -0.4 +0.7 +0.7 -0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.9 -1.2 -0.1 +0.4 +0.0
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.6 +1.5 -0.6 -0.2 -0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.7 +0.1 -1.8 +1.1 +0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 +0.0 -1.1 +1.5 +0.1
carbon source N-acetylneuraminic (C) +0.8 -0.7 -0.4 +0.8 +0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +1.7 -1.4 +0.8 -0.2 -0.0
carbon source amylopectin from maize (C) +1.0 +1.1 +0.4 -0.9 -0.6
carbon source Pectic galactan from potato (C) +0.6 -0.4 +1.3 -0.4 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.8 -0.7 +0.2 +1.0 +0.0
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) +0.9 -0.6 +0.3 +1.0 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.9 -1.0 -0.3 +2.5 +0.1
carbon source D-Fructose 2.5 mg/ml (C) +0.1 +0.8 -0.0 +1.7 +0.2
carbon source Pectin from apple; filtered 1 mg/ml (C) +1.4 +0.7 +0.4 +0.1 +0.0
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +1.5 +0.3 +0.2 +0.8 -0.0
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +2.1 +0.9 +0.3 +0.1 -0.1
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