Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS13820 and ABI39_RS13825 are separated by 267 nucleotidesABI39_RS13825 and ABI39_RS13830 are separated by 261 nucleotidesABI39_RS13830 and ABI39_RS13835 are separated by 35 nucleotidesABI39_RS13835 and ABI39_RS13840 overlap by 23 nucleotides ABI39_RS13820: ABI39_RS13820 - DUF4625 domain-containing protein, at 3,592,446 to 3,592,940 _RS13820 ABI39_RS13825: ABI39_RS13825 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, at 3,593,208 to 3,594,494 _RS13825 ABI39_RS13830: ABI39_RS13830 - L-lactate permease, at 3,594,756 to 3,596,255 _RS13830 ABI39_RS13835: ABI39_RS13835 - DUF3037 domain-containing protein, at 3,596,291 to 3,596,674 _RS13835 ABI39_RS13840: ABI39_RS13840 - hypothetical protein, at 3,596,652 to 3,597,434 _RS13840
Group Condition ABI39_RS13820 ABI39_RS13825 ABI39_RS13830 ABI39_RS13835 ABI39_RS13840
carbon source Beta-Lactose 2.5 mg/ml (C) -0.3 -0.2 -0.1 -3.8 +0.2
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.1 +0.1 +0.1 -3.7 -0.3
carbon source amylopectin from maize (C) -0.0 -0.1 +0.1 -3.8 +0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -2.1 -0.0 +0.2 -2.3 +0.4
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.2 +0.2 -0.1 -3.1 -0.2
carbon source D-Glucosamine Hydrochloride 2.5 mg/ml (C) -0.3 -0.1 +0.2 -3.1 -0.1
carbon source D-Arabinose (C) +0.0 -0.0 +0.0 -3.0 -0.1
carbon source N-acetylneuraminic (C) -0.1 -0.0 +0.1 -3.3 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.1 -0.2 +0.2 -3.2 +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -2.0 +0.0 +0.2 -1.5 +0.2
carbon source amylopectin from maize (C) -0.2 +0.0 -0.0 -3.0 +0.2
carbon source N-acetylneuraminic (C) +0.1 -0.2 -0.0 -3.1 +0.1
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.0 -0.1 +0.1 -2.7 -0.3
carbon source Beta-Lactose 2.5 mg/ml (C) -0.2 +0.0 +0.1 -3.0 +0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.0 -0.0 +0.6 -3.6 +0.2
carbon source B-glucan from yeast (C) -0.2 +0.1 -0.0 -2.3 -0.2
carbon source Glycogen; autoclaved 2.5 mg/ml (C) +0.1 +0.0 -0.0 -2.6 -0.1
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.1 -0.1 -0.1 -2.1 -0.4
carbon source D-Glucosamine Hydrochloride 2.5 mg/ml (C) -0.1 +0.0 +0.0 -2.5 +0.1
carbon source Mucin from porcine stomach type III (C) +0.3 -0.2 +0.1 -2.0 -0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.3 +0.2 +0.4 -2.0 -1.0
carbon source B-glucan from yeast (C) +0.3 +0.1 -0.1 -2.1 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.1 +0.1 +0.2 -2.9 +0.5
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.2 +0.0 +0.0 -2.4 +0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.1 +0.6 -2.1 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.1 +0.4 +0.5 -1.3 -0.7
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 +0.5 +0.6 -1.2 -0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.4 +0.3 +0.7 -0.7 -1.0
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.3 -0.1 +0.5 +1.1 -0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -1.5 -0.0 +0.6 +1.3 -0.2
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