Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS13730 and ABI39_RS13735 are separated by 12 nucleotidesABI39_RS13735 and ABI39_RS13740 are separated by 35 nucleotidesABI39_RS13740 and ABI39_RS13745 are separated by 455 nucleotidesABI39_RS13745 and ABI39_RS13750 are separated by 340 nucleotides ABI39_RS13730: ABI39_RS13730 - hypothetical protein, at 3,571,788 to 3,572,663 _RS13730 ABI39_RS13735: ABI39_RS13735 - radical SAM protein, at 3,572,676 to 3,573,782 _RS13735 ABI39_RS13740: ABI39_RS13740 - radical SAM protein, at 3,573,818 to 3,574,921 _RS13740 ABI39_RS13745: ABI39_RS13745 - hypothetical protein, at 3,575,377 to 3,575,772 _RS13745 ABI39_RS13750: ABI39_RS13750 - hypothetical protein, at 3,576,113 to 3,576,502 _RS13750
Group Condition ABI39_RS13730 ABI39_RS13735 ABI39_RS13740 ABI39_RS13745 ABI39_RS13750
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.8 +0.3 +0.2 -0.1 -1.4
carbon source NAG 2.5 mg/ml (C) -0.1 -0.3 +0.0 -0.2 -1.0
carbon source Beta-Lactose 2.5 mg/ml (C) -0.3 +0.1 -0.3 -0.3 -0.7
carbon source Beta-Lactose 2.5 mg/ml (C) -0.1 -0.3 +0.3 -0.1 -1.2
carbon source D-Fructose 2.5 mg/ml (C) -0.3 -0.1 -0.0 -0.1 -0.8
carbon source D-Glucose 2.5 mg/ml (C) -0.6 +0.2 -0.0 -0.2 -0.6
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.4 +0.1 +0.1 -0.1 -0.8
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.4 +0.1 +0.1 -0.2 -0.6
carbon source D-Xylose 2.5 mg/ml (C) -0.4 +0.2 -0.1 -0.2 -0.4
carbon source D-Glucose 2.5 mg/ml (C) -0.5 +0.0 +0.2 -0.1 -0.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 +0.2 -0.0 +0.0 -0.9
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.5 +0.2 +0.1 -0.0 -0.7
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 +0.2 -0.1 -0.1 -0.5
carbon source D-Mannose 2.5 mg/ml (C) -0.3 +0.3 -0.1 -0.1 -0.5
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.2 -0.1 +0.1 -0.7
carbon source amylopectin from maize (C) -0.1 -0.4 +0.3 -0.5 +0.5
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.0 +0.3 -0.3 +0.4 -0.4
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.5 -0.2 -0.2 +0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.1 +0.2 +0.1 +0.7 -0.5
carbon source B-glucan from yeast (C) +0.2 +0.2 -0.1 -0.3 +0.6
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.2 -0.4 +0.3 +0.2 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.4 +0.5 +0.3 +0.0 +0.3
carbon source polygalacturonic (ultrapure) (C) +0.2 +0.1 -0.2 +0.0 +0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.4 +0.3 +0.2 +0.1 +0.6
carbon source Galactan from Potato (C) +0.6 +0.1 -0.1 +0.2 +0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.0 +0.7 +0.3 +0.3 +0.0
carbon source Galactan from Potato (C) +0.1 +0.1 +0.1 +0.3 +1.0
carbon source B-glucan from yeast (C) +0.3 +0.3 +0.2 +0.2 +0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 +0.3 +0.8 +0.2 +0.5
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 +0.1 +0.4 +0.3 +1.1
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