Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS13525 and ABI39_RS13530 are separated by 85 nucleotidesABI39_RS13530 and ABI39_RS13535 are separated by 147 nucleotidesABI39_RS13535 and ABI39_RS13540 are separated by 17 nucleotidesABI39_RS13540 and ABI39_RS13545 are separated by 12 nucleotides ABI39_RS13525: ABI39_RS13525 - DUF4981 domain-containing protein, at 3,522,498 to 3,525,689 _RS13525 ABI39_RS13530: ABI39_RS13530 - beta-glycosidase, at 3,525,775 to 3,528,615 _RS13530 ABI39_RS13535: ABI39_RS13535 - discoidin domain-containing protein, at 3,528,763 to 3,531,993 _RS13535 ABI39_RS13540: ABI39_RS13540 - sialate O-acetylesterase, at 3,532,011 to 3,533,435 _RS13540 ABI39_RS13545: ABI39_RS13545 - hypothetical protein, at 3,533,448 to 3,535,679 _RS13545
Group Condition ABI39_RS13525 ABI39_RS13530 ABI39_RS13535 ABI39_RS13540 ABI39_RS13545
carbon source D-Glucose 2.5 mg/ml (C) -0.1 -0.2 -0.3 -0.1 -0.1
carbon source amylopectin from maize (C) -0.2 +0.1 -0.3 -0.2 +0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.1 +0.2 -0.4 -0.1 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.0 +0.4 -0.2 -0.1 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.0 +0.3 -0.2 -0.1
carbon source amylopectin from maize (C) -0.2 +0.3 +0.2 -0.1 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.0 +0.2 -0.2 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.0 -0.1 +0.3 -0.2 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 +0.2 +0.0 +0.4 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.1 +0.2 +0.1 +0.1 -0.2
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.2 -0.2 +0.1 +0.1 +0.1
carbon source D-Glucose 5 mg/ml (C) +0.2 -0.1 +0.2 +0.1 -0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.2 -0.2 +0.3 +0.0 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 -0.1 +0.2 +0.2 -0.1
carbon source Amylopectin from Potato (C) +0.0 +0.2 -0.2 +0.2 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 +0.2 +0.1 +0.4 -0.0
carbon source B-glucan from yeast (C) -0.1 +0.2 +0.0 +0.2 +0.2
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.1 -0.1 +0.2 +0.2 +0.2
carbon source Galactan from Potato (C) -0.4 +0.2 +0.3 +0.4 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.3 +0.1 +0.3 -0.2 +0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.2 +0.2 +0.0 +0.3 -0.0
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.4 +0.2 +0.1 +0.1 +0.0
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.2 +0.1 +0.2 +0.4 -0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.0 +0.5 +0.1 +0.2 +0.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.5 -0.0 +0.0 +0.3 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.3 +0.1 +0.1 +0.1 +0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.3 -0.0 +0.0 +0.4 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.3 +0.0 +0.2 +0.3 +0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 +0.3 +0.4 +0.3 +0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.5 +0.2 +0.2 +0.2 +0.2
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