Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS13115 and ABI39_RS13120 are separated by 8 nucleotidesABI39_RS13120 and ABI39_RS13125 are separated by 111 nucleotidesABI39_RS13125 and ABI39_RS13130 are separated by 98 nucleotidesABI39_RS13130 and ABI39_RS13135 are separated by 152 nucleotides ABI39_RS13115: ABI39_RS13115 - tRNA-Gly, at 3,421,771 to 3,421,843 _RS13115 ABI39_RS13120: ABI39_RS13120 - tRNA-Tyr, at 3,421,852 to 3,421,934 _RS13120 ABI39_RS13125: ABI39_RS13125 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,422,046 to 3,422,552 _RS13125 ABI39_RS13130: ABI39_RS13130 - tetratricopeptide repeat protein, at 3,422,651 to 3,423,328 _RS13130 ABI39_RS13135: ABI39_RS13135 - DNA replication and repair protein RecF, at 3,423,481 to 3,424,596 _RS13135
Group Condition ABI39_RS13115 ABI39_RS13120 ABI39_RS13125 ABI39_RS13130 ABI39_RS13135
carbon source Galactan from Potato (C) N.D. N.D. N.D. N.D. -1.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.9
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. N.D. N.D. N.D. -0.9
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.8
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.8
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.7
carbon source B-glucan from yeast (C) N.D. N.D. N.D. N.D. -0.7
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.6
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.6
carbon source Glucose-6-Phosphate (C) N.D. N.D. N.D. N.D. -0.6
carbon source Dextrin from potato starch (C) N.D. N.D. N.D. N.D. -0.5
carbon source Pectin from apple; filtered 1 mg/ml (C) N.D. N.D. N.D. N.D. -0.5
carbon source polygalacturonic (ultrapure) (C) N.D. N.D. N.D. N.D. -0.5
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. N.D. N.D. -0.5
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. -0.5
carbon source Starch from potato (C) N.D. N.D. N.D. N.D. -0.5
carbon source Mucin from porcine stomach,Type II (C) N.D. N.D. N.D. N.D. -0.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. N.D. N.D. +0.5
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.5
carbon source Mucin from porcine stomach,Type II (C) N.D. N.D. N.D. N.D. +0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.5
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.6
carbon source amylopectin from maize (C) N.D. N.D. N.D. N.D. +0.6
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) N.D. N.D. N.D. N.D. +0.6
carbon source N-acetylneuraminic (C) N.D. N.D. N.D. N.D. +0.7
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.7
carbon source Amylopectin from Potato (C) N.D. N.D. N.D. N.D. +0.7
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.8
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.9
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +0.9
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