Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS12380 and ABI39_RS12385 are separated by 173 nucleotidesABI39_RS12385 and ABI39_RS12390 are separated by 22 nucleotidesABI39_RS12390 and ABI39_RS12395 are separated by 97 nucleotidesABI39_RS12395 and ABI39_RS12400 are separated by 4 nucleotides ABI39_RS12380: ABI39_RS12380 - acyltransferase, at 3,263,007 to 3,264,158 _RS12380 ABI39_RS12385: ABI39_RS12385 - transcriptional repressor, at 3,264,332 to 3,264,757 _RS12385 ABI39_RS12390: ABI39_RS12390 - heavy metal translocating P-type ATPase, at 3,264,780 to 3,266,489 _RS12390 ABI39_RS12395: ABI39_RS12395 - hypothetical protein, at 3,266,587 to 3,267,405 _RS12395 ABI39_RS12400: ABI39_RS12400 - SDR family oxidoreductase, at 3,267,410 to 3,268,168 _RS12400
Group Condition ABI39_RS12380 ABI39_RS12385 ABI39_RS12390 ABI39_RS12395 ABI39_RS12400
carbon source Fructose-6-phosphate (C) -0.1 -1.9 -0.2 +0.1 -0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 -1.2 -0.2 +0.1 -0.2
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.1 -1.5 -0.1 +0.1 +0.0
carbon source amylopectin from maize (C) +0.0 -1.0 +0.1 +0.0 -0.5
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.2 -0.4 -0.1 -0.2 -0.3
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.1 -0.8 -0.1 -0.2 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.1 -0.8 -0.2 +0.2 -0.2
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.4 +0.1 -0.1 -0.2 -0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.0 -0.6 -0.1 +0.2 -0.6
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.0 -0.6 -0.2 -0.2 -0.1
carbon source Fructose-6-phosphate (C) +0.1 -0.8 -0.1 +0.1 -0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.3 -0.7 -0.1 +0.1 -0.1
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.6 -0.1 +0.1 -0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.2 -0.6 -0.0 +0.1 -0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.3 -0.7 +0.1 +0.1 +0.0
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.2 -0.6 -0.0 -0.1 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 -0.8 +0.3 -0.2 -0.1
carbon source Pectic galactan from potato (C) -0.0 -0.5 +0.0 +0.1 -0.4
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.3 -0.6 -0.1 +0.4 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.1 -0.4 +0.2 -0.4 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.6 +0.1 +0.1 +0.2
carbon source Amylopectin from Potato (C) -0.1 +0.3 -0.1 +0.2 -0.5
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.2 +0.4 -0.1 -0.1 -0.2
carbon source Xylan from Beechwood (C) -0.1 -0.5 -0.1 +0.2 +0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.3 +0.4 -0.3 +0.0 -0.0
carbon source amylopectin from maize (C) +0.1 -0.0 -0.2 +0.5 -0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 +0.5 -0.2 +0.2 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 +0.4 -0.1 +0.2 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.3 +0.7 -0.2 +0.1 +0.1
carbon source Galactan from Potato (C) -0.1 +2.3 -0.0 -0.0 +0.5
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