Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS12360 and ABI39_RS12365 are separated by 158 nucleotidesABI39_RS12365 and ABI39_RS12375 are separated by 533 nucleotidesABI39_RS12375 and ABI39_RS12380 are separated by 117 nucleotidesABI39_RS12380 and ABI39_RS12385 are separated by 173 nucleotides ABI39_RS12360: ABI39_RS12360 - PH domain-containing protein, at 3,260,747 to 3,261,190 _RS12360 ABI39_RS12365: ABI39_RS12365 - hypothetical protein, at 3,261,349 to 3,261,792 _RS12365 ABI39_RS12375: ABI39_RS12375 - Crp/Fnr family transcriptional regulator, at 3,262,326 to 3,262,889 _RS12375 ABI39_RS12380: ABI39_RS12380 - acyltransferase, at 3,263,007 to 3,264,158 _RS12380 ABI39_RS12385: ABI39_RS12385 - transcriptional repressor, at 3,264,332 to 3,264,757 _RS12385
Group Condition ABI39_RS12360 ABI39_RS12365 ABI39_RS12375 ABI39_RS12380 ABI39_RS12385
carbon source Fructose-6-phosphate (C) -0.2 +0.1 -0.0 -0.1 -1.9
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.1 +0.1 +0.1 -0.1 -1.5
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.1 +0.3 -0.6 -0.1 -0.8
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.3 +0.3 -0.3 -0.3 -0.6
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.4 -0.1 -0.3 -1.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.6 +0.2 -0.7 +0.1 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.9 +0.5 -0.1 -0.1 -0.4
carbon source Fructose-6-phosphate (C) +0.1 +0.3 -0.5 +0.1 -0.8
carbon source amylopectin from maize (C) -0.5 +0.5 +0.4 +0.0 -1.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.4 +0.4 +0.1 -0.3 -0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.4 +0.3 +0.2 -0.0 -0.6
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.3 +0.2 +0.1 -0.3 -0.7
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.0 +0.1 -0.6 -0.4 +0.4
carbon source Starch from potato (C) -0.2 -0.0 -0.6 +0.1 +0.5
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.3 +0.4 -0.1 -0.2 -0.6
carbon source Amylopectin from Potato (C) -0.8 +0.4 -0.1 -0.1 +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 +0.5 +0.2 -0.1 -0.4
carbon source Amylopectin from Potato (C) -0.5 +0.7 +0.4 -0.0 -0.6
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.3 +0.2 -0.2 -0.3 +0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.6 +1.2 +0.2 -0.0 -0.6
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 +0.7 +0.5 -0.1 -0.1
carbon source Galactan from Potato (C) -0.9 +0.7 +0.5 -0.0 +0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.3 +0.4 -0.1 -0.1 +0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 +0.7 +0.6 -0.1 -0.8
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.2 +0.6 +0.1 -0.3 +0.4
carbon source amylopectin from maize (C) -0.5 +0.5 +0.5 +0.1 -0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.4 +0.7 -0.2 -0.1 +0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.1 +0.3 +0.3 -0.3 +0.5
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.4 +0.5 +0.1 -0.1 +0.5
carbon source Galactan from Potato (C) -0.4 +0.8 +0.3 -0.1 +2.3
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