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Protein
Homologs
Fitness for 5 genes in
Phocaeicola dorei CL03T12C01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABI39_RS11925 and ABI39_RS11930 are separated by 186 nucleotides
ABI39_RS11930 and ABI39_RS11935 are separated by 12 nucleotides
ABI39_RS11935 and ABI39_RS11940 are separated by 75 nucleotides
ABI39_RS11940 and ABI39_RS11945 are separated by 83 nucleotides
ABI39_RS11925: ABI39_RS11925 - DUF4923 family protein, at 3,157,280 to 3,157,876
_RS11925
ABI39_RS11930: ABI39_RS11930 - recombinase RecA, at 3,158,063 to 3,159,106
_RS11930
ABI39_RS11935: ABI39_RS11935 - thioredoxin-dependent thiol peroxidase, at 3,159,119 to 3,159,565
_RS11935
ABI39_RS11940: ABI39_RS11940 - saccharopine dehydrogenase family protein, at 3,159,641 to 3,160,834
_RS11940
ABI39_RS11945: ABI39_RS11945 - hypothetical protein, at 3,160,918 to 3,162,171
_RS11945
Group
Condition
ABI39
_RS11925
ABI39
_RS11930
ABI39
_RS11935
ABI39
_RS11940
ABI39
_RS11945
carbon source
Amylopectin from Potato (C)
-0.1
-1.2
-0.4
-2.1
-0.2
carbon source
Amylopectin from Potato (C)
-0.1
-0.4
-0.6
-2.2
-0.2
carbon source
Red Arabinan from sugar-beet; filtered 5 mg/ml (C)
-0.0
-1.1
-0.1
-2.1
+0.0
carbon source
Galactose 1-phosphate dipotassium salt (C)
+0.1
-1.0
-0.0
-2.2
-0.1
carbon source
Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
+0.2
-2.1
-0.3
-0.8
-0.2
carbon source
Beta-Lactose (C)
+0.1
-0.9
+0.0
-2.3
-0.1
carbon source
b-Glucan from Beet (1,2-b-Glucan) (C)
-0.1
-0.2
-0.4
-2.3
-0.2
carbon source
NAG 2.5 mg/ml (C)
-0.1
-0.2
+0.1
-3.0
+0.2
carbon source
Xylan from corn core; autoclaved 2.5 mg/ml (C)
+0.2
-1.0
+0.1
-2.3
+0.0
carbon source
D-Xylose (C)
-0.0
-1.2
-0.1
-1.7
-0.0
carbon source
Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
-0.3
-1.3
-0.3
-0.7
-0.3
carbon source
D-Mannose 2.5 mg/ml (C)
+0.3
-0.6
-0.1
-2.6
+0.2
nitrogen source
L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen
+0.1
-0.7
-0.2
-1.8
-0.1
carbon source
Galactose 1-phosphate dipotassium salt (C)
+0.1
-0.6
-0.2
-1.9
-0.0
carbon source
Starch from potato (C)
-0.0
-0.3
-0.3
-2.2
+0.0
carbon source
Red Arabinan from sugar-beet; filtered 5 mg/ml (C)
+0.1
-0.3
-0.2
-2.3
-0.1
carbon source
D-Mannose 2.5 mg/ml (C)
+0.3
-0.5
+0.1
-2.4
+0.0
carbon source
b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
-0.2
+0.3
+0.1
-2.3
-0.3
carbon source
D-Arabinose (C)
+0.2
-0.6
-0.1
-2.0
+0.1
carbon source
b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
-0.1
+0.1
+0.2
-2.2
-0.3
carbon source
amylopectin from maize (C)
+0.3
-0.5
-0.6
-1.1
-0.3
carbon source
Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
+0.3
-0.2
-0.3
-1.9
-0.0
carbon source
D-Xylose 2.5 mg/ml (C)
+0.2
-0.6
+0.1
-1.9
+0.2
carbon source
D-Galactose 2.5 mg/ml (C)
+0.3
-0.2
+0.1
-2.2
+0.1
carbon source
Starch from potato (C)
+0.1
+0.3
-0.4
-1.9
-0.0
carbon source
b-Glucan from Beet (1,2-b-Glucan) (C)
+0.1
+0.5
-0.2
-2.2
+0.0
carbon source
amylopectin from maize; autoclaved 2.5 mg/ml (C)
+0.5
+0.1
-0.4
-1.7
-0.1
carbon source
D-Glucose 2.5 mg/ml (C)
+0.3
+0.2
+0.1
-2.1
+0.1
carbon source
Galactan from Potato (C)
+0.2
+1.1
-0.6
-1.7
-0.3
carbon source
D-Glucose 2.5 mg/ml (C)
+0.4
+0.0
+0.2
-1.9
+0.2
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