Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS11925 and ABI39_RS11930 are separated by 186 nucleotidesABI39_RS11930 and ABI39_RS11935 are separated by 12 nucleotidesABI39_RS11935 and ABI39_RS11940 are separated by 75 nucleotidesABI39_RS11940 and ABI39_RS11945 are separated by 83 nucleotides ABI39_RS11925: ABI39_RS11925 - DUF4923 family protein, at 3,157,280 to 3,157,876 _RS11925 ABI39_RS11930: ABI39_RS11930 - recombinase RecA, at 3,158,063 to 3,159,106 _RS11930 ABI39_RS11935: ABI39_RS11935 - thioredoxin-dependent thiol peroxidase, at 3,159,119 to 3,159,565 _RS11935 ABI39_RS11940: ABI39_RS11940 - saccharopine dehydrogenase family protein, at 3,159,641 to 3,160,834 _RS11940 ABI39_RS11945: ABI39_RS11945 - hypothetical protein, at 3,160,918 to 3,162,171 _RS11945
Group Condition ABI39_RS11925 ABI39_RS11930 ABI39_RS11935 ABI39_RS11940 ABI39_RS11945
carbon source Amylopectin from Potato (C) -0.1 -1.2 -0.4 -2.1 -0.2
carbon source Amylopectin from Potato (C) -0.1 -0.4 -0.6 -2.2 -0.2
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.0 -1.1 -0.1 -2.1 +0.0
carbon source Galactose 1-phosphate dipotassium salt (C) +0.1 -1.0 -0.0 -2.2 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 -2.1 -0.3 -0.8 -0.2
carbon source Beta-Lactose (C) +0.1 -0.9 +0.0 -2.3 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -0.1 -0.2 -0.4 -2.3 -0.2
carbon source NAG 2.5 mg/ml (C) -0.1 -0.2 +0.1 -3.0 +0.2
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) +0.2 -1.0 +0.1 -2.3 +0.0
carbon source D-Xylose (C) -0.0 -1.2 -0.1 -1.7 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.3 -1.3 -0.3 -0.7 -0.3
carbon source D-Mannose 2.5 mg/ml (C) +0.3 -0.6 -0.1 -2.6 +0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 -0.7 -0.2 -1.8 -0.1
carbon source Galactose 1-phosphate dipotassium salt (C) +0.1 -0.6 -0.2 -1.9 -0.0
carbon source Starch from potato (C) -0.0 -0.3 -0.3 -2.2 +0.0
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) +0.1 -0.3 -0.2 -2.3 -0.1
carbon source D-Mannose 2.5 mg/ml (C) +0.3 -0.5 +0.1 -2.4 +0.0
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.2 +0.3 +0.1 -2.3 -0.3
carbon source D-Arabinose (C) +0.2 -0.6 -0.1 -2.0 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.1 +0.1 +0.2 -2.2 -0.3
carbon source amylopectin from maize (C) +0.3 -0.5 -0.6 -1.1 -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.3 -0.2 -0.3 -1.9 -0.0
carbon source D-Xylose 2.5 mg/ml (C) +0.2 -0.6 +0.1 -1.9 +0.2
carbon source D-Galactose 2.5 mg/ml (C) +0.3 -0.2 +0.1 -2.2 +0.1
carbon source Starch from potato (C) +0.1 +0.3 -0.4 -1.9 -0.0
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 +0.5 -0.2 -2.2 +0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.5 +0.1 -0.4 -1.7 -0.1
carbon source D-Glucose 2.5 mg/ml (C) +0.3 +0.2 +0.1 -2.1 +0.1
carbon source Galactan from Potato (C) +0.2 +1.1 -0.6 -1.7 -0.3
carbon source D-Glucose 2.5 mg/ml (C) +0.4 +0.0 +0.2 -1.9 +0.2
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