Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS11760 and ABI39_RS11765 are separated by 40 nucleotidesABI39_RS11765 and ABI39_RS11770 are separated by 3 nucleotidesABI39_RS11770 and ABI39_RS11775 are separated by 22 nucleotidesABI39_RS11775 and ABI39_RS11780 are separated by 12 nucleotides ABI39_RS11760: ABI39_RS11760 - FtsX-like permease family protein, at 3,119,096 to 3,120,346 _RS11760 ABI39_RS11765: ABI39_RS11765 - ABC transporter permease, at 3,120,387 to 3,121,667 _RS11765 ABI39_RS11770: ABI39_RS11770 - FtsX-like permease family protein, at 3,121,671 to 3,122,942 _RS11770 ABI39_RS11775: ABI39_RS11775 - ABC transporter permease, at 3,122,965 to 3,124,221 _RS11775 ABI39_RS11780: ABI39_RS11780 - FtsX-like permease family protein, at 3,124,234 to 3,125,478 _RS11780
Group Condition ABI39_RS11760 ABI39_RS11765 ABI39_RS11770 ABI39_RS11775 ABI39_RS11780
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.5 -0.1 +0.1 -0.3 +0.1
carbon source NAG 2.5 mg/ml (C) -0.2 -0.3 +0.2 -0.3 -0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.2 -0.5 -0.2 +0.1 +0.1
carbon source amylopectin from maize (C) -0.3 -0.2 +0.1 +0.3 -0.1
carbon source Beta-Lactose 2.5 mg/ml (C) -0.1 -0.2 +0.4 -0.2 -0.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.2 -0.5 +0.2 +0.2 -0.2
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -0.1 -0.3 +0.1 +0.4 -0.1
carbon source Beta-Lactose 2.5 mg/ml (C) +0.3 -0.3 +0.4 -0.2 -0.1
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.1 -0.3 -0.2 +0.5 -0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.1 -0.3 -0.0 +0.3 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.2 -0.2 +0.0 +0.3 -0.2
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.2 -0.2 +0.1 +0.2 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.3 -0.4 +0.1 +0.2 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.1 -0.6 -0.1 +0.9 -0.1
carbon source amylopectin from maize (C) -0.3 -0.0 -0.2 +0.2 +0.7
carbon source a-Cyclodextrin (C) -0.3 +0.3 +0.2 +0.1 +0.1
carbon source Amylopectin from Potato (C) -0.2 -0.3 +0.5 +0.2 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.2 +0.5 -0.1 +0.3 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 -0.5 +0.5 -0.0 +0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.2 +0.4 -0.2 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 -0.5 +0.5 +0.4 -0.1
carbon source D-Glucose 5 mg/ml (C) +0.1 -0.2 +0.3 +0.2 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.3 -0.0 +0.6 +0.2 +0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 -0.1 +0.3 +0.4 +0.0
carbon source Galactan from Potato (C) -0.2 +0.7 +0.1 -0.1 +0.4
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.0 +0.3 +0.2 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.0 +0.0 +0.3 +0.2 +0.4
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.1 -0.1 +0.3 +0.3 +0.3
carbon source Red Arabinan from sugar-beet (C) +0.1 +0.3 +0.2 +0.2 +0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.1 +0.2 +0.5 +0.5 -0.1
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