Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS22035 and ABI39_RS11000 are separated by 57 nucleotidesABI39_RS11000 and ABI39_RS11005 are separated by 94 nucleotidesABI39_RS11005 and ABI39_RS11010 are separated by 255 nucleotidesABI39_RS11010 and ABI39_RS22745 are separated by 66 nucleotides ABI39_RS22035: ABI39_RS22035 - DEAD/DEAH box helicase family protein, at 2,948,512 to 2,948,832 _RS22035 ABI39_RS11000: ABI39_RS11000 - hypothetical protein, at 2,948,890 to 2,949,252 _RS11000 ABI39_RS11005: ABI39_RS11005 - YjbH domain-containing protein, at 2,949,347 to 2,950,105 _RS11005 ABI39_RS11010: ABI39_RS11010 - IS66 family transposase, at 2,950,361 to 2,952,154 _RS11010 ABI39_RS22745: ABI39_RS22745 - IS66 family insertion sequence element accessory protein TnpB, at 2,952,221 to 2,952,847 _RS22745
Group Condition ABI39_RS22035 ABI39_RS11000 ABI39_RS11005 ABI39_RS11010 ABI39_RS22745
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.5 -5.4 +0.0 N.D. N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.7 -2.2 -0.2 N.D. N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.5 -1.5 +0.1 N.D. N.D.
carbon source Galactan from Potato (C) -1.3 -0.9 -0.3 N.D. N.D.
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.9 -1.0 -0.0 N.D. N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.8 -1.0 -0.2 N.D. N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.7 -0.9 -0.4 N.D. N.D.
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.6 -1.2 -0.0 N.D. N.D.
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 -2.1 +0.2 N.D. N.D.
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.6 -0.7 -0.2 N.D. N.D.
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -1.0 -0.3 -0.2 N.D. N.D.
carbon source D-Glucose (C) -0.4 -1.1 +0.0 N.D. N.D.
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 -1.1 -0.1 N.D. N.D.
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.9 +0.5 +0.1 N.D. N.D.
carbon source Starch from potato (C) -0.9 +1.0 -0.0 N.D. N.D.
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.7 +0.9 -0.1 N.D. N.D.
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.6 +0.9 -0.1 N.D. N.D.
carbon source amylopectin from maize (C) -0.5 +1.3 -0.4 N.D. N.D.
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.1 +1.2 -0.2 N.D. N.D.
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.1 +1.4 -0.4 N.D. N.D.
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.2 +0.8 +0.5 N.D. N.D.
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) +0.4 +0.9 -0.2 N.D. N.D.
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.3 +1.7 -0.0 N.D. N.D.
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 +1.6 -0.1 N.D. N.D.
carbon source amylopectin from maize (C) -0.7 +1.8 +0.4 N.D. N.D.
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.0 +1.5 -0.1 N.D. N.D.
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -0.0 +1.4 +0.1 N.D. N.D.
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.0 +1.9 +0.0 N.D. N.D.
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.4 +2.1 -0.2 N.D. N.D.
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.7 +2.0 +0.3 N.D. N.D.
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ABI39_RS22035
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ABI39_RS11000
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ABI39_RS11010
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