Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS10915 and ABI39_RS10920 are separated by 5 nucleotidesABI39_RS10920 and ABI39_RS10925 are separated by 182 nucleotidesABI39_RS10925 and ABI39_RS10930 are separated by 319 nucleotidesABI39_RS10930 and ABI39_RS10935 are separated by 21 nucleotides ABI39_RS10915: ABI39_RS10915 - beta-galactosidase, at 2,922,432 to 2,924,246 _RS10915 ABI39_RS10920: ABI39_RS10920 - galactose mutarotase, at 2,924,252 to 2,925,385 _RS10920 ABI39_RS10925: ABI39_RS10925 - response regulator, at 2,925,568 to 2,929,518 _RS10925 ABI39_RS10930: ABI39_RS10930 - TonB-dependent receptor, at 2,929,838 to 2,932,837 _RS10930 ABI39_RS10935: ABI39_RS10935 - RagB/SusD family nutrient uptake outer membrane protein, at 2,932,859 to 2,934,448 _RS10935
Group Condition ABI39_RS10915 ABI39_RS10920 ABI39_RS10925 ABI39_RS10930 ABI39_RS10935
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) -0.2 -0.7 -0.0 -0.0 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -0.3 -0.1 +0.0 -0.1 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.4 -0.3 -0.1 +0.1 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.0 -0.3 -0.1 -0.0 -0.4
carbon source amylopectin from maize (C) +0.0 -0.8 +0.2 -0.1 -0.1
carbon source N-acetylneuraminic (C) -0.0 -0.4 +0.0 -0.1 -0.2
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.1 -0.6 +0.0 +0.0 -0.1
carbon source Amylopectin from Potato (C) -0.1 -0.4 +0.0 -0.0 -0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.1 -0.3 -0.0 -0.0 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -0.3 -0.1 +0.0 -0.1 -0.2
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.1 -0.4 +0.0 -0.1 -0.1
carbon source B-glucan from yeast (C) -0.2 -0.2 +0.1 -0.0 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.5 +0.1 -0.1 -0.1 +0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.1 -0.4 +0.1 -0.1 -0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 -0.4 -0.1 +0.3 -0.4
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.2 -0.2 -0.1 -0.1 -0.1
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.2 -0.1 -0.0 +0.1 -0.3
carbon source amylopectin from maize (C) +0.1 +0.4 -0.0 +0.0 -0.4
carbon source D-Glucose 2.5 mg/ml (C) +0.2 -0.0 +0.1 +0.1 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.3 +0.1 -0.1 +0.2 -0.1
carbon source D-Galactose 2.5 mg/ml (C) +0.1 +0.3 +0.1 +0.1 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.5 -0.0 +0.1 +0.0 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 +0.0 -0.0 +0.4 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.3 +0.0 +0.0 +0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.3 +0.1 +0.1 +0.0
carbon source Galactan from Potato (C) +0.2 -0.0 +0.2 +0.2 +0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.2 +0.0 +0.1 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 +0.3 +0.1 +0.2 +0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.3 +0.7 -0.0 -0.1 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.3 +0.4 -0.0 +0.3 +0.4
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ABI39_RS10915
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