Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS10415 and ABI39_RS10420 are separated by 45 nucleotidesABI39_RS10420 and ABI39_RS10425 are separated by 256 nucleotidesABI39_RS10425 and ABI39_RS10430 are separated by 597 nucleotidesABI39_RS10430 and ABI39_RS10435 are separated by 4 nucleotides ABI39_RS10415: ABI39_RS10415 - DUF1847 domain-containing protein, at 2,785,751 to 2,786,392 _RS10415 ABI39_RS10420: ABI39_RS10420 - DNA repair protein RadA, at 2,786,438 to 2,787,805 _RS10420 ABI39_RS10425: ABI39_RS10425 - DUF3078 domain-containing protein, at 2,788,062 to 2,788,943 _RS10425 ABI39_RS10430: ABI39_RS10430 - bifunctional aspartate kinase/homoserine dehydrogenase I, at 2,789,541 to 2,791,973 _RS10430 ABI39_RS10435: ABI39_RS10435 - cofactor-independent phosphoglycerate mutase, at 2,791,978 to 2,793,189 _RS10435
Group Condition ABI39_RS10415 ABI39_RS10420 ABI39_RS10425 ABI39_RS10430 ABI39_RS10435
carbon source D-Arabinose (C) +0.1 -0.1 +0.1 -8.0 -7.9
carbon source Starch from potato (C) +0.5 -0.1 -0.0 -6.9 -8.6
carbon source D-Arabinose (C) +0.2 -0.1 +0.3 -7.8 -7.2
carbon source Xylan from Beechwood (C) +0.1 -0.1 +0.1 -7.5 -6.9
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.9 -0.0 -0.0 -6.6 -6.7
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.8 -0.0 +0.1 -7.1 -6.4
carbon source Xylan from Beechwood (C) -0.0 -0.0 -0.1 -6.7 -7.3
carbon source Pectic galactan from potato (C) +0.2 +0.2 -0.3 -6.9 -6.9
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.7 -0.3 -0.0 -6.7 -6.0
carbon source D-Glucosamine Hydrochloride (C) -0.0 -0.0 +0.0 -6.9 -6.7
carbon source a-Cyclodextrin (C) +0.2 +0.1 +0.1 -7.0 -7.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.4 +0.0 +0.1 -5.7 -7.4
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.6 +0.1 -0.2 -6.6 -6.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.7 -0.1 -0.0 -5.8 -6.5
carbon source D-Glucose (C) +0.4 +0.2 +0.0 -7.3 -6.5
carbon source D-Glucose 5 mg/ml (C) -0.0 -0.1 -0.2 -6.4 -6.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.2 -0.1 -6.3 -6.4
carbon source Amylopectin from Potato (C) +0.1 +0.3 +0.3 -7.4 -6.3
carbon source D-Glucose (C) +0.0 +0.2 -0.0 -6.5 -6.5
carbon source a-Cyclodextrin (C) +0.1 +0.1 -0.0 -6.8 -6.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.7 +0.2 +0.3 -6.1 -6.4
carbon source Beta-Lactose (C) +0.2 -0.0 -0.1 -6.4 -6.5
carbon source Amylopectin from Potato (C) +1.3 +0.1 +0.0 -6.8 -7.4
carbon source D-Glucosamine Hydrochloride (C) +0.1 -0.1 +0.1 -6.8 -6.0
carbon source Dextrin from potato starch (C) +0.3 -0.0 -0.0 -5.9 -7.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.2 -0.3 +0.1 -6.2 -6.4
carbon source D-Mannose (C) +0.2 +0.2 -0.0 -6.1 -6.4
carbon source D-Mannose (C) +0.5 +0.3 -0.0 -5.9 -6.8
carbon source Galactan from Potato (C) +1.4 -0.1 +0.0 -6.8 -5.5
carbon source Galactan from Potato (C) +1.4 -0.2 +0.7 -5.8 -6.1
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ABI39_RS10415
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ABI39_RS10420
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