Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS10120 and ABI39_RS10125 are separated by 95 nucleotidesABI39_RS10125 and ABI39_RS10130 are separated by 48 nucleotidesABI39_RS10130 and ABI39_RS10135 are separated by 6 nucleotidesABI39_RS10135 and ABI39_RS10140 are separated by 566 nucleotides ABI39_RS10120: ABI39_RS10120 - FprA family A-type flavoprotein, at 2,702,994 to 2,704,181 _RS10120 ABI39_RS10125: ABI39_RS10125 - mechanosensitive ion channel, at 2,704,277 to 2,705,110 _RS10125 ABI39_RS10130: ABI39_RS10130 - threonylcarbamoyl-AMP synthase, at 2,705,159 to 2,705,773 _RS10130 ABI39_RS10135: ABI39_RS10135 - AAA family ATPase, at 2,705,780 to 2,707,780 _RS10135 ABI39_RS10140: ABI39_RS10140 - SPFH domain-containing protein, at 2,708,347 to 2,709,297 _RS10140
Group Condition ABI39_RS10120 ABI39_RS10125 ABI39_RS10130 ABI39_RS10135 ABI39_RS10140
carbon source Starch from potato (C) -0.0 N.D. -0.4 -0.2 +0.2
carbon source Pectic galactan from potato (C) +0.0 N.D. -0.2 -0.4 +0.3
carbon source Pectic galactan from potato (C) -0.1 N.D. -0.1 -0.3 +0.3
carbon source D-Xylose (C) -0.0 N.D. -0.2 -0.3 +0.3
carbon source Galactan from Potato (C) +0.3 N.D. -0.7 -0.3 +0.6
carbon source Galactan from Potato (C) +0.0 N.D. -0.7 -0.4 +1.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.6 N.D. -0.0 -0.2 -0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.0 N.D. +0.2 +0.5 -0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.3 N.D. -0.2 -0.0 +0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 N.D. +0.2 -0.3 +0.5
carbon source amylopectin from maize (C) +0.3 N.D. +0.4 -0.4 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.0 N.D. +0.3 -0.2 +0.5
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.1 N.D. +0.3 -0.2 +0.4
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.3 N.D. -0.1 -0.1 +0.5
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.0 N.D. +0.7 +0.1 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.4 N.D. -0.1 -0.1 +0.6
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.0 N.D. +0.1 -0.1 +0.7
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 N.D. +0.2 -0.0 +0.5
carbon source D-Mannose 2.5 mg/ml (C) +0.2 N.D. +0.3 +0.1 +0.3
carbon source D-Fructose 2.5 mg/ml (C) +0.1 N.D. +0.5 +0.1 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 N.D. -0.0 -0.0 +0.8
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.5 N.D. +0.1 -0.0 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.2 N.D. +0.2 -0.2 +0.6
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 N.D. +0.2 +0.1 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.2 N.D. +0.1 +0.1 +0.7
carbon source Beta-Lactose 2.5 mg/ml (C) +0.1 N.D. +0.6 +0.3 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.3 N.D. +0.2 +0.3 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.8 N.D. +0.1 -0.1 +0.4
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 N.D. +0.3 +0.2 +0.6
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.3 N.D. +0.3 +0.1 +1.1
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