Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS09975 and ABI39_RS09980 are separated by 59 nucleotidesABI39_RS09980 and ABI39_RS09985 overlap by 4 nucleotidesABI39_RS09985 and ABI39_RS09990 are separated by 108 nucleotidesABI39_RS09990 and ABI39_RS09995 are separated by 82 nucleotides ABI39_RS09975: ABI39_RS09975 - DUF1295 domain-containing protein, at 2,668,173 to 2,668,937 _RS09975 ABI39_RS09980: ABI39_RS09980 - NADH:flavin oxidoreductase, at 2,668,997 to 2,670,223 _RS09980 ABI39_RS09985: ABI39_RS09985 - SDR family NAD(P)-dependent oxidoreductase, at 2,670,220 to 2,671,080 _RS09985 ABI39_RS09990: ABI39_RS09990 - DMT family transporter, at 2,671,189 to 2,672,115 _RS09990 ABI39_RS09995: ABI39_RS09995 - AAA family ATPase, at 2,672,198 to 2,673,019 _RS09995
Group Condition ABI39_RS09975 ABI39_RS09980 ABI39_RS09985 ABI39_RS09990 ABI39_RS09995
carbon source D-Glucose 2.5 mg/ml (C) +0.0 -0.1 -0.0 -0.1 -1.5
carbon source D-Glucose 2.5 mg/ml (C) -0.1 -0.0 +0.1 -0.2 -1.6
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.0 -0.4 -0.5 -0.0 +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 +0.1 -0.5 -0.3 -0.3
carbon source NAG 2.5 mg/ml (C) -0.6 -0.3 +0.4 +0.1 -0.8
carbon source D-Fructose 2.5 mg/ml (C) -0.1 -0.2 +0.3 -0.1 -1.2
carbon source D-Fructose 2.5 mg/ml (C) -0.3 -0.0 +0.1 -0.1 -0.9
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.3 +0.2 -0.7 +0.1 -0.3
carbon source Amylopectin from Potato (C) +0.5 -0.0 -0.6 -0.1 -0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.1 -0.4 -0.4 +0.3
carbon source Mucin from porcine stomach type III (C) +0.4 +0.1 -0.8 +0.0 +0.0
carbon source D-Galactose 2.5 mg/ml (C) -0.2 -0.2 +0.4 +0.1 -0.4
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.2 -0.0 -0.3 -0.1 +0.5
carbon source amylopectin from maize (C) +0.3 -0.1 -0.4 -0.5 +0.4
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.4 -0.1 -0.4 +0.1 -0.1
carbon source beta-Cyclodextrin (C) +0.6 -0.0 -0.4 -0.1 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 -0.2 +0.7 -0.3 -0.0
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.7 -0.1 -0.6 -0.2 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.6 +0.2 -0.3 +0.0 -0.5
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.4 +0.3 +0.5 -0.4 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.0 -0.1 -0.4 +0.8
carbon source Glycogen; autoclaved 2.5 mg/ml (C) +0.5 +0.1 -0.3 -0.3 +0.2
carbon source D-Mannose (C) +0.6 -0.1 +0.2 -0.4 +0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.5 -0.1 -0.4 -0.1 +0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.6 +0.1 -0.4 +0.2 -0.1
carbon source Fructose-6-phosphate (C) +0.5 -0.1 -0.0 +0.4 -0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 +0.0 +0.0 -0.2 +0.8
carbon source Galactan from Potato (C) +0.7 +0.1 -0.1 -0.3 +0.2
carbon source amylopectin from maize (C) +0.8 +0.1 -0.0 -0.2 +0.3
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.6 +0.2 +0.4 +0.1 +0.5
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