Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS09590 and ABI39_RS09595 overlap by 17 nucleotidesABI39_RS09595 and ABI39_RS09600 are separated by 107 nucleotidesABI39_RS09600 and ABI39_RS09605 are separated by 109 nucleotidesABI39_RS09605 and ABI39_RS09610 are separated by 479 nucleotides ABI39_RS09590: ABI39_RS09590 - ADP-ribosylglycohydrolase family protein, at 2,583,983 to 2,584,768 _RS09590 ABI39_RS09595: ABI39_RS09595 - DNA polymerase IV, at 2,584,752 to 2,585,843 _RS09595 ABI39_RS09600: ABI39_RS09600 - cation:proton antiporter, at 2,585,951 to 2,588,134 _RS09600 ABI39_RS09605: ABI39_RS09605 - tRNA-Pro, at 2,588,244 to 2,588,318 _RS09605 ABI39_RS09610: ABI39_RS09610 - site-specific integrase, at 2,588,798 to 2,590,041 _RS09610
Group Condition ABI39_RS09590 ABI39_RS09595 ABI39_RS09600 ABI39_RS09605 ABI39_RS09610
carbon source Galactan from Potato (C) -0.6 +0.2 -0.2 N.D. -0.6
carbon source Galactan from Potato (C) -0.6 +0.2 +0.0 N.D. -0.6
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.3 -0.2 +0.2 N.D. -0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.7 +0.1 +0.1 N.D. +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.6 +0.4 +0.1 N.D. -0.1
carbon source amylopectin from maize (C) -0.1 -0.1 +0.3 N.D. -0.4
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.4 +0.3 +0.1 N.D. -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.5 -0.2 +0.2 N.D. +0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 -0.2 +0.2 N.D. +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.5 +0.5 +0.2 N.D. -0.1
carbon source amylopectin from maize (C) -0.4 -0.2 +0.3 N.D. +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.3 -0.1 +0.1 N.D. +0.3
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.4 +0.0 +0.3 N.D. +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.4 +0.2 +0.1 N.D. +0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.2 -0.2 +0.2 N.D. +0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.3 +0.2 +0.3 N.D. -0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.4 +0.1 +0.1 N.D. +0.4
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.3 +0.1 +0.2 N.D. +0.2
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.3 +0.2 +0.2 N.D. +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.4 +0.1 +0.4 N.D. +0.4
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.4 -0.0 +0.3 N.D. +0.5
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.3 -0.0 +0.4 N.D. +0.4
carbon source D-Glucose 5 mg/ml (C) -0.2 +0.1 +0.2 N.D. +0.4
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.4 +0.0 +0.5 N.D. +0.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 +0.3 -0.0 N.D. +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 -0.1 +0.5 N.D. +0.6
carbon source NAG 2.5 mg/ml (C) +0.2 +0.3 -0.0 N.D. +0.4
carbon source NAG 2.5 mg/ml (C) +0.2 +0.2 +0.1 N.D. +0.5
carbon source Beta-Lactose 2.5 mg/ml (C) +0.2 +0.1 +0.2 N.D. +0.5
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.2 +0.3 +0.2 N.D. +0.3
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