Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS08435 and ABI39_RS08440 are separated by 71 nucleotidesABI39_RS08440 and ABI39_RS08445 are separated by 16 nucleotidesABI39_RS08445 and ABI39_RS08450 are separated by 12 nucleotidesABI39_RS08450 and ABI39_RS08455 are separated by 97 nucleotides ABI39_RS08435: ABI39_RS08435 - GTP-binding protein, at 2,246,957 to 2,248,180 _RS08435 ABI39_RS08440: ABI39_RS08440 - family 43 glycosylhydrolase, at 2,248,252 to 2,251,119 _RS08440 ABI39_RS08445: ABI39_RS08445 - RagB/SusD family nutrient uptake outer membrane protein, at 2,251,136 to 2,252,854 _RS08445 ABI39_RS08450: ABI39_RS08450 - TonB-dependent receptor, at 2,252,867 to 2,256,115 _RS08450 ABI39_RS08455: ABI39_RS08455 - response regulator, at 2,256,213 to 2,260,685 _RS08455
Group Condition ABI39_RS08435 ABI39_RS08440 ABI39_RS08445 ABI39_RS08450 ABI39_RS08455
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.3 -0.1 -0.1 -0.2 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 -0.1 +0.1 -0.2 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.4 -0.1 -0.5 -0.2 -0.2
carbon source Galactan from Potato (C) +0.1 -0.2 -0.1 -0.2 -0.1
carbon source Galactan from Potato (C) +0.1 +0.0 -0.1 -0.3 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.1 -0.0 +0.1 -0.4 +0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 -0.0 -0.1 -0.2 -0.2
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) +0.2 -0.1 -0.1 -0.1 -0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.2 -0.2 +0.1 -0.2 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.0 +0.0 +0.1 -0.2 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 -0.0 -0.1 -0.2 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.4 -0.0 -0.2 -0.2 -0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.2 -0.1 -0.2 -0.1 +0.1
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.3 -0.0 -0.2 -0.1 -0.0
carbon source amylopectin from maize (C) +0.4 +0.1 -0.2 -0.1 -0.2
carbon source N-acetylneuraminic (C) +0.3 +0.0 -0.2 +0.0 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.1 +0.1 -0.0 -0.2
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) +0.3 -0.1 +0.0 -0.1 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.2 -0.0 +0.2 -0.2 -0.1
carbon source Amylopectin from Potato (C) +0.2 -0.1 +0.1 -0.1 -0.0
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.2 +0.1 +0.1 -0.1 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 +0.1 -0.1 +0.1 -0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 +0.1 -0.2 +0.2 -0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.4 +0.1 -0.0 +0.0 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.3 +0.0 +0.0 +0.1 -0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.0 +0.1 +0.2 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.4 +0.0 -0.0 +0.1 -0.1
carbon source amylopectin from maize (C) +0.4 +0.1 -0.1 +0.1 -0.1
carbon source D-Mannose (C) +0.3 +0.1 +0.1 -0.1 +0.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.4 +0.0 +0.0 +0.1 -0.1
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