Fitness for 5 genes in Phocaeicola dorei CL03T12C01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 158 experiments or choose conditions or try the comparative fitness browser

500 ntABI39_RS07990 and ABI39_RS07995 are separated by 29 nucleotidesABI39_RS07995 and ABI39_RS08000 are separated by 9 nucleotidesABI39_RS08000 and ABI39_RS08005 are separated by 16 nucleotidesABI39_RS08005 and ABI39_RS08010 are separated by 185 nucleotides ABI39_RS07990: ABI39_RS07990 - biopolymer transporter ExbD, at 2,152,412 to 2,153,062 _RS07990 ABI39_RS07995: ABI39_RS07995 - energy transducer TonB, at 2,153,092 to 2,153,904 _RS07995 ABI39_RS08000: ABI39_RS08000 - substrate-binding domain-containing protein, at 2,153,914 to 2,154,861 _RS08000 ABI39_RS08005: ABI39_RS08005 - tetratricopeptide repeat protein, at 2,154,878 to 2,156,293 _RS08005 ABI39_RS08010: ABI39_RS08010 - ATP-binding cassette domain-containing protein, at 2,156,479 to 2,157,321 _RS08010
Group Condition ABI39_RS07990 ABI39_RS07995 ABI39_RS08000 ABI39_RS08005 ABI39_RS08010
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.4 -0.3 -0.5 -0.2 -0.2
carbon source Galactan from Potato (C) -0.7 -0.1 -0.3 -0.2 -0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.0 -0.2 -0.8 -0.3 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.4 -0.4 -0.2 -0.3 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.3 -0.2 -0.0 -0.4 -0.5
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.2 -0.3 -0.2 -0.3 -0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.0 -0.4 -0.1 -0.3 -0.2
carbon source B-glucan from yeast (C) -0.3 -0.1 -0.2 -0.2 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.3 -0.4 -0.2 -0.3 +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.2 -0.2 +0.0 -0.2 -0.3
carbon source Galactose 1-phosphate dipotassium salt (C) -0.1 +0.1 -0.3 -0.2 -0.1
carbon source B-glucan from yeast (C) -0.3 -0.3 -0.0 -0.1 +0.1
carbon source Galactan from Potato (C) -0.3 -0.0 -0.0 -0.4 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 +0.2 +0.1 -0.3 +0.1
carbon source Fructose-6-phosphate (C) +0.2 -0.3 -0.2 -0.1 -0.1
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.1 -0.4 -0.0 -0.1 +0.2
carbon source amylopectin from maize (C) +0.2 -0.8 +0.3 -0.0 -0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.1 -0.1 -0.2 -0.3 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.1 -0.4 +0.3 -0.1 -0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.2 -0.3 +0.3 -0.3 +0.0
carbon source D-Glucosamine Hydrochloride 2.5 mg/ml (C) -0.1 -0.2 +0.3 -0.1 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.1 +0.1 +0.5 -0.3 -0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.2 -0.3 +0.5 -0.1 +0.3
carbon source Amylopectin from Potato (C) +0.3 +0.2 +0.2 -0.1 -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.1 -0.1 +0.5 -0.2 +0.3
carbon source D-Galactose 2.5 mg/ml (C) +0.2 -0.2 +0.3 +0.0 +0.4
carbon source amylopectin from maize (C) +0.1 +0.3 +0.1 -0.1 +0.3
carbon source D-Fructose 2.5 mg/ml (C) +0.1 +0.3 +0.1 +0.2 +0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.0 +0.2 +0.1 +0.5
carbon source Beta-Lactose 2.5 mg/ml (C) +0.2 +0.4 +0.2 +0.1 +0.2
remove
ABI39_RS07990
plot		 remove
ABI39_RS07995
plot		 remove
ABI39_RS08000		 remove
ABI39_RS08005
plot		 remove
ABI39_RS08010
plot