Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07970 and ABI39_RS07975 are separated by 569 nucleotidesABI39_RS07975 and ABI39_RS07980 are separated by 108 nucleotidesABI39_RS07980 and ABI39_RS07985 are separated by 28 nucleotidesABI39_RS07985 and ABI39_RS07990 are separated by 12 nucleotides ABI39_RS07970: ABI39_RS07970 - 5S ribosomal RNA, at 2,149,757 to 2,149,867 _RS07970 ABI39_RS07975: ABI39_RS07975 - hypothetical protein, at 2,150,437 to 2,150,841 _RS07975 ABI39_RS07980: ABI39_RS07980 - MotA/TolQ/ExbB proton channel family protein, at 2,150,950 to 2,151,765 _RS07980 ABI39_RS07985: ABI39_RS07985 - biopolymer transporter ExbD, at 2,151,794 to 2,152,399 _RS07985 ABI39_RS07990: ABI39_RS07990 - biopolymer transporter ExbD, at 2,152,412 to 2,153,062 _RS07990
Group Condition ABI39_RS07970 ABI39_RS07975 ABI39_RS07980 ABI39_RS07985 ABI39_RS07990
carbon source Galactan from Potato (C) N.D. -0.4 +0.1 -0.3 -0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. -0.2 -0.6 +0.0 -0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -0.4 -0.5 -0.2 +0.0
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.4 -0.2 -0.2 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. -0.6 -0.1 +0.1 -0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. -0.5 -0.4 +0.2 -0.3
carbon source Galactan from Potato (C) N.D. -0.7 -0.2 +0.4 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. -0.4 +0.2 -0.1 -0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. +0.2 -0.2 -0.6 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -0.4 -0.3 +0.2 -0.3
carbon source Pectin from apple; filtered 1 mg/ml (C) N.D. -0.0 +0.2 -0.4 -0.2
carbon source D-Galactose (C) N.D. -0.2 +0.2 -0.2 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. -0.1 +0.3 -0.4 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.4 +0.1 +0.2 -0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. -0.5 -0.1 +0.3 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.4 +0.1 -0.3 +0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. +0.6 +0.3 -0.5 -0.0
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. +0.3 +0.1 +0.2 -0.3
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) N.D. +0.6 +0.1 -0.1 -0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.3 +0.3 -0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. +0.4 +0.3 +0.2 -0.2
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. +0.3 +0.2 +0.3 +0.1
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) N.D. +0.4 +0.1 +0.3 +0.0
carbon source amylopectin from maize (C) N.D. +0.1 +0.6 +0.0 +0.2
carbon source N-acetylneuraminic (C) N.D. +0.4 +0.3 +0.3 -0.1
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) N.D. +0.4 +0.2 +0.2 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.2 +0.7 -0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. +0.5 +0.3 +0.3 -0.0
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. +0.3 +0.2 +0.4 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.6 +0.3 +0.5 +0.0
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ABI39_RS07970
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ABI39_RS07975
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