Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07730 and ABI39_RS07735 are separated by 47 nucleotidesABI39_RS07735 and ABI39_RS07740 are separated by 7 nucleotidesABI39_RS07740 and ABI39_RS07745 overlap by 26 nucleotidesABI39_RS07745 and ABI39_RS07750 are separated by 81 nucleotides ABI39_RS07730: ABI39_RS07730 - primosomal protein N', at 2,093,983 to 2,096,445 _RS07730 ABI39_RS07735: ABI39_RS07735 - phosphatase, at 2,096,493 to 2,097,203 _RS07735 ABI39_RS07740: ABI39_RS07740 - low molecular weight phosphotyrosine protein phosphatase, at 2,097,211 to 2,097,681 _RS07740 ABI39_RS07745: ABI39_RS07745 - HDIG domain-containing protein, at 2,097,656 to 2,099,713 _RS07745 ABI39_RS07750: ABI39_RS07750 - glutamate--tRNA ligase, at 2,099,795 to 2,101,312 _RS07750
Group Condition ABI39_RS07730 ABI39_RS07735 ABI39_RS07740 ABI39_RS07745 ABI39_RS07750
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. -1.6 +0.0 -0.0 N.D.
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. -1.7 -0.1 +0.4 N.D.
carbon source Glycogen; autoclaved 2.5 mg/ml (C) N.D. -0.5 +0.1 -1.0 N.D.
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) N.D. -0.3 -0.1 -0.8 N.D.
carbon source amylopectin from maize (C) N.D. -0.6 +0.0 -0.7 N.D.
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.2 -0.1 -1.0 N.D.
carbon source Glycogen; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.1 -1.1 N.D.
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. -1.0 +0.0 -0.1 N.D.
carbon source Glycogen; filtered 2.5 mg/ml (C) N.D. +0.2 +0.1 -1.4 N.D.
carbon source Glycogen; filtered 2.5 mg/ml (C) N.D. -0.2 +0.1 -1.0 N.D.
carbon source amylopectin from maize (C) N.D. -0.7 +0.5 -0.7 N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. -1.4 +0.1 +0.3 N.D.
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -1.0 -0.2 +0.3 N.D.
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.9 -0.2 +0.4 N.D.
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.9 +0.2 +0.1 N.D.
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.6 -0.4 +0.4 N.D.
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) N.D. +0.5 -0.1 -0.9 N.D.
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. -0.9 +0.3 +0.2 N.D.
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -0.7 -0.0 +0.6 N.D.
carbon source Mucin from porcine stomach type III (C) N.D. -0.5 +0.2 +0.5 N.D.
carbon source Galactan from Potato (C) N.D. -0.7 +0.4 +0.5 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.4 -0.1 +0.8 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.1 -0.4 +0.9 N.D.
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. -0.4 +0.1 +0.8 N.D.
carbon source Amylopectin from Potato (C) N.D. -0.5 +0.5 +0.7 N.D.
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.1 -0.2 +1.2 N.D.
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. -0.9 +0.5 +1.3 N.D.
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.1 +1.2 N.D.
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.3 +0.3 +1.2 N.D.
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.3 +1.4 N.D.
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