Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07715 and ABI39_RS07725 are separated by 854 nucleotidesABI39_RS07725 and ABI39_RS07730 are separated by 72 nucleotidesABI39_RS07730 and ABI39_RS07735 are separated by 47 nucleotidesABI39_RS07735 and ABI39_RS07740 are separated by 7 nucleotides ABI39_RS07715: ABI39_RS07715 - RagB/SusD family nutrient uptake outer membrane protein, at 2,090,801 to 2,092,447 _RS07715 ABI39_RS07725: ABI39_RS07725 - porin family protein, at 2,093,302 to 2,093,910 _RS07725 ABI39_RS07730: ABI39_RS07730 - primosomal protein N', at 2,093,983 to 2,096,445 _RS07730 ABI39_RS07735: ABI39_RS07735 - phosphatase, at 2,096,493 to 2,097,203 _RS07735 ABI39_RS07740: ABI39_RS07740 - low molecular weight phosphotyrosine protein phosphatase, at 2,097,211 to 2,097,681 _RS07740
Group Condition ABI39_RS07715 ABI39_RS07725 ABI39_RS07730 ABI39_RS07735 ABI39_RS07740
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.0 -2.3 N.D. -0.6 -0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.2 -1.0 N.D. -1.6 +0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 -1.5 N.D. -1.0 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.2 -1.2 N.D. -0.9 -0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 -0.7 N.D. -1.0 -0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 -1.0 N.D. -0.7 -0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.0 -0.2 N.D. -1.7 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.2 -1.3 N.D. -0.6 +0.2
carbon source Xylan from Beechwood (C) -0.1 -1.1 N.D. -0.7 -0.0
carbon source Xylan from Beechwood (C) -0.0 -1.4 N.D. -0.1 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.3 -0.6 N.D. -0.9 +0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 -1.2 N.D. -0.2 -0.0
carbon source (+)-Arabinogalactan (C) -0.1 -0.6 N.D. -0.6 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.1 -0.5 N.D. -0.9 +0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.0 -0.6 N.D. -0.7 -0.0
carbon source Pectic galactan from potato (C) -0.0 -0.5 N.D. -0.6 -0.2
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.0 -0.9 N.D. -0.5 +0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.2 -0.6 N.D. -0.9 +0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 +0.2 N.D. -1.4 +0.1
carbon source Mucin from porcine stomach type III (C) -0.1 -0.7 N.D. -0.5 +0.2
carbon source Amylopectin from Potato (C) +0.0 -1.2 N.D. +0.0 +0.2
carbon source amylopectin from maize (C) -0.1 -0.6 N.D. -0.7 +0.5
carbon source NAG (C) +0.1 -1.1 N.D. +0.1 +0.1
carbon source Amylopectin from Potato (C) -0.1 -0.7 N.D. -0.5 +0.5
carbon source Pectic galactan from potato (C) +0.1 -0.6 N.D. -0.5 +0.2
carbon source Galactan from Potato (C) -0.1 -0.4 N.D. -0.6 +0.3
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.2 -0.4 N.D. -0.5 +0.3
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.4 -0.7 N.D. +0.2 +0.2
carbon source Galactan from Potato (C) -0.1 -0.2 N.D. -0.7 +0.4
carbon source NAG 2.5 mg/ml (C) +0.0 +0.7 N.D. +0.3 -0.3
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