Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS22685 and ABI39_RS23165 overlap by 4 nucleotidesABI39_RS23165 and ABI39_RS07665 are separated by 997 nucleotidesABI39_RS07665 and ABI39_RS07670 are separated by 22 nucleotidesABI39_RS07670 and ABI39_RS07675 are separated by 269 nucleotides ABI39_RS22685: ABI39_RS22685 - hypothetical protein, at 2,072,015 to 2,072,173 _RS22685 ABI39_RS23165: ABI39_RS23165 - hypothetical protein, at 2,072,170 to 2,072,689 _RS23165 ABI39_RS07665: ABI39_RS07665 - RagB/SusD family nutrient uptake outer membrane protein, at 2,073,687 to 2,076,002 _RS07665 ABI39_RS07670: ABI39_RS07670 - TonB-dependent receptor, at 2,076,025 to 2,079,408 _RS07670 ABI39_RS07675: ABI39_RS07675 - glycoside hydrolase N-terminal domain-containing protein, at 2,079,678 to 2,082,155 _RS07675
Group Condition ABI39_RS22685 ABI39_RS23165 ABI39_RS07665 ABI39_RS07670 ABI39_RS07675
carbon source a-Cyclodextrin 2.5 mg/ml (C) -1.2 +0.0 +0.1 -0.0 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -1.1 -0.1 +0.3 +0.1 -0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -1.1 +0.3 +0.0 -0.0 -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -1.5 +0.7 +0.1 +0.0 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -1.2 -0.1 +0.4 +0.1 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -1.3 +0.5 +0.1 +0.1 -0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.5 -0.5 +0.4 +0.5 -0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -1.0 -0.1 +0.6 +0.4 -0.2
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.5 -0.1 +0.4 +0.4 -0.2
carbon source D-Glucose 5 mg/ml (C) -0.7 -0.0 +0.6 +0.5 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -1.0 -0.6 +1.0 +0.9 -0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.5 -0.1 +0.5 +0.5 -0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.4 -0.2 +0.6 +0.5 -0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.6 -0.1 +0.6 +0.5 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.4 -0.2 +0.6 +0.5 -0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.7 +0.2 +0.6 +0.6 -0.2
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.5 +0.8 +0.2 +0.2 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.9 +0.2 +0.7 +0.7 -0.1
carbon source Galactan from Potato (C) -0.6 -0.6 +1.0 +1.1 -0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.8 -0.6 +1.4 +1.4 -0.3
carbon source Galactan from Potato (C) -0.3 -0.1 +1.0 +0.9 -0.3
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.2 -0.1 +0.7 +1.0 -0.1
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.2 -0.1 +0.6 +0.9 +0.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -1.1 -0.3 +1.5 +1.6 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 -0.1 +1.5 +1.3 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.7 -0.0 +1.7 +1.5 -0.4
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.9 +0.2 +1.6 +1.6 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.9 +0.1 +1.8 +1.8 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.8 +0.0 +2.0 +2.0 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.9 +0.1 +2.2 +2.1 -0.1
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ABI39_RS22685
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ABI39_RS23165
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