Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07560 and ABI39_RS07565 are separated by 112 nucleotidesABI39_RS07565 and ABI39_RS07570 are separated by 30 nucleotidesABI39_RS07570 and ABI39_RS07575 are separated by 232 nucleotidesABI39_RS07575 and ABI39_RS07580 overlap by 4 nucleotides ABI39_RS07560: ABI39_RS07560 - hypothetical protein, at 2,054,198 to 2,054,647 _RS07560 ABI39_RS07565: ABI39_RS07565 - hypothetical protein, at 2,054,760 to 2,055,233 _RS07565 ABI39_RS07570: ABI39_RS07570 - helix-turn-helix domain-containing protein, at 2,055,264 to 2,055,506 _RS07570 ABI39_RS07575: ABI39_RS07575 - hypothetical protein, at 2,055,739 to 2,056,152 _RS07575 ABI39_RS07580: ABI39_RS07580 - hypothetical protein, at 2,056,149 to 2,056,769 _RS07580
Group Condition ABI39_RS07560 ABI39_RS07565 ABI39_RS07570 ABI39_RS07575 ABI39_RS07580
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -5.1 N.D. N.D. -0.2 -0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -3.5 N.D. N.D. -0.1 -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -2.1 N.D. N.D. +0.3 -0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -2.3 N.D. N.D. +0.2 -0.2
carbon source Glucose-6-Phosphate (C) -0.9 N.D. N.D. +0.0 -0.3
carbon source D-Mannose (C) -0.3 N.D. N.D. -0.1 -0.7
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.6 N.D. N.D. -0.5 -0.9
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.0 N.D. N.D. +0.2 -0.1
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -1.1 N.D. N.D. +0.4 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.7 N.D. N.D. +0.2 -0.3
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -1.0 N.D. N.D. +0.3 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -1.0 N.D. N.D. +0.3 -0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -1.0 N.D. N.D. +0.4 -0.0
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.4 N.D. N.D. +0.4 -0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.6 N.D. N.D. +0.5 -0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -1.4 N.D. N.D. +0.7 +0.3
carbon source Beta-Lactose 2.5 mg/ml (C) -0.5 N.D. N.D. +0.5 -0.3
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) -1.0 N.D. N.D. +0.4 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 N.D. N.D. +0.4 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.8 N.D. N.D. +0.8 -0.0
carbon source Pectic galactan from potato (C) +0.6 N.D. N.D. +0.2 -0.4
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.4 N.D. N.D. +0.4 -0.4
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) +0.2 N.D. N.D. +0.5 -0.3
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.5 N.D. N.D. +0.5 -0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.7 N.D. N.D. +0.7 -0.4
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.3 N.D. N.D. +0.8 +0.1
carbon source Fructose-6-phosphate (C) +1.1 N.D. N.D. +0.1 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.8 N.D. N.D. +0.2 +0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +1.0 N.D. N.D. +0.4 +0.3
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +1.0 N.D. N.D. +1.0 +0.1
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ABI39_RS07560
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ABI39_RS07565
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