Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07255 and ABI39_RS07260 are separated by 433 nucleotidesABI39_RS07260 and ABI39_RS07265 are separated by 270 nucleotidesABI39_RS07265 and ABI39_RS07270 are separated by 3 nucleotidesABI39_RS07270 and ABI39_RS07275 are separated by 285 nucleotides ABI39_RS07255: ABI39_RS07255 - site-specific integrase, at 1,992,212 to 1,993,435 _RS07255 ABI39_RS07260: ABI39_RS07260 - Fic family protein, at 1,993,869 to 1,994,678 _RS07260 ABI39_RS07265: ABI39_RS07265 - DUF2971 domain-containing protein, at 1,994,949 to 1,995,719 _RS07265 ABI39_RS07270: ABI39_RS07270 - tetratricopeptide repeat protein, at 1,995,723 to 1,997,567 _RS07270 ABI39_RS07275: ABI39_RS07275 - hypothetical protein, at 1,997,853 to 1,999,256 _RS07275
Group Condition ABI39_RS07255 ABI39_RS07260 ABI39_RS07265 ABI39_RS07270 ABI39_RS07275
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.6 -0.3 +0.1 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.2 -0.5 -0.1 -0.0 -0.1
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.4 -0.4 -0.2 -0.0 +0.1
carbon source Beta-Lactose 2.5 mg/ml (C) -0.2 -0.3 -0.3 -0.1 +0.2
carbon source Beta-Lactose 2.5 mg/ml (C) -0.1 -0.4 -0.3 -0.0 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.0 +0.2 -0.6 -0.2 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.4 -0.3 +0.1 +0.1 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.5 +0.3 +0.3 -0.0 -0.6
carbon source N-acetylneuraminic (C) -0.3 -0.3 -0.1 -0.1 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.2 +0.2 -0.0 +0.1 -0.5
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.3 -0.2 +0.1 +0.1 -0.2
carbon source D-Galactose (C) +0.2 -0.5 +0.0 +0.0 -0.2
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.3 +0.3 -0.1 -0.1 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 -0.6 +0.1 +0.0 +0.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 -0.3 -0.1 -0.0 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.2 +0.6 -0.0 +0.0 -0.6
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.3 +0.4 -0.2 -0.1 -0.1
carbon source Galactan from Potato (C) +0.1 +0.4 -0.1 +0.1 -0.7
carbon source Mucin from porcine stomach type III (C) +0.1 -0.5 +0.1 +0.1 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.2 +0.3 +0.1 +0.1 -0.4
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.1 -0.3 +0.3 +0.1 -0.1
carbon source NAG 2.5 mg/ml (C) +0.0 +0.2 -0.4 -0.1 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.4 +0.7 +0.1 -0.1 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.2 +0.9 +0.1 -0.1 -0.8
carbon source Galactan from Potato (C) -0.2 +0.4 +0.0 +0.3 -0.4
carbon source amylopectin from maize (C) -0.3 +0.5 +0.3 -0.2 -0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.1 +0.6 -0.2 +0.1 -0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.3 +0.5 -0.2 +0.1 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.6 +0.6 -0.1 +0.3 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.4 +1.3 +0.2 +0.1 -0.4
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