Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS07230 and ABI39_RS07235 are separated by 30 nucleotidesABI39_RS07235 and ABI39_RS07240 are separated by 99 nucleotidesABI39_RS07240 and ABI39_RS07245 are separated by 9 nucleotidesABI39_RS07245 and ABI39_RS07250 are separated by 247 nucleotides ABI39_RS07230: ABI39_RS07230 - hypothetical protein, at 1,988,700 to 1,989,113 _RS07230 ABI39_RS07235: ABI39_RS07235 - GNAT family N-acetyltransferase, at 1,989,144 to 1,989,575 _RS07235 ABI39_RS07240: ABI39_RS07240 - Crp/Fnr family transcriptional regulator, at 1,989,675 to 1,990,217 _RS07240 ABI39_RS07245: ABI39_RS07245 - Crp/Fnr family transcriptional regulator, at 1,990,227 to 1,990,799 _RS07245 ABI39_RS07250: ABI39_RS07250 - DUF1016 family protein, at 1,991,047 to 1,992,186 _RS07250
Group Condition ABI39_RS07230 ABI39_RS07235 ABI39_RS07240 ABI39_RS07245 ABI39_RS07250
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.3 -0.6 +0.0 -0.1 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.8 -0.5 +0.2 +0.1 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.6 -0.7 +0.1 +0.4 +0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.8 +0.0 +0.1 -0.0 +0.0
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.6 -0.1 +0.1 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.3 -0.2 +0.1 -0.1
carbon source NAG 2.5 mg/ml (C) -0.4 +0.0 +0.1 -0.0 -0.3
carbon source Beta-Lactose 2.5 mg/ml (C) -0.5 +0.3 -0.0 -0.2 -0.1
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.3 -0.3 -0.1 +0.1 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.3 -0.3 +0.1 +0.2 -0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.4 -0.2 +0.0 +0.1 +0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.0 -0.4 -0.1 +0.1 +0.1
carbon source Galactose 1-phosphate dipotassium salt (C) -0.3 -0.2 -0.1 +0.2 +0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.1 -0.5 +0.2 -0.1 +0.2
carbon source D-Mannose 2.5 mg/ml (C) -0.4 -0.1 +0.2 +0.1 +0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.2 -0.3 -0.1 -0.1 +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.6 +0.3 +0.1 -0.0 +0.1
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.3 -0.1 +0.2 +0.0 +0.2
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.1 -0.2 +0.3 +0.0 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 +0.2 +0.3 +0.0 -0.2
carbon source Amylopectin from Potato (C) +0.2 -0.1 -0.3 +0.0 +0.3
carbon source Galactan from Potato (C) +0.4 -0.2 +0.0 +0.1 -0.2
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.2 -0.3 +0.2 +0.2 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.4 -0.3 +0.3 +0.1 -0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 +0.1 +0.1 -0.2 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 -0.4 +0.3 +0.2 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.0 -0.2 +0.4 +0.1 +0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.5 +0.2 -0.2 -0.0 +0.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.1 +0.6 +0.1 +0.1 -0.0
carbon source D-Glucose 2.5 mg/ml (C) +0.0 +0.2 +0.1 +0.2 +0.3
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