Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS06165 and ABI39_RS06170 are separated by 36 nucleotidesABI39_RS06170 and ABI39_RS06175 are separated by 30 nucleotidesABI39_RS06175 and ABI39_RS06180 are separated by 183 nucleotidesABI39_RS06180 and ABI39_RS06185 are separated by 245 nucleotides ABI39_RS06165: ABI39_RS06165 - GtrA family protein, at 1,712,360 to 1,712,733 _RS06165 ABI39_RS06170: ABI39_RS06170 - glycosyltransferase, at 1,712,770 to 1,713,717 _RS06170 ABI39_RS06175: ABI39_RS06175 - alkaline phosphatase family protein, at 1,713,748 to 1,715,775 _RS06175 ABI39_RS06180: ABI39_RS06180 - glycosyltransferase family 2 protein, at 1,715,959 to 1,716,942 _RS06180 ABI39_RS06185: ABI39_RS06185 - glycosyltransferase, at 1,717,188 to 1,718,504 _RS06185
Group Condition ABI39_RS06165 ABI39_RS06170 ABI39_RS06175 ABI39_RS06180 ABI39_RS06185
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -3.3 -1.6 -0.7 +0.1 +0.2
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -2.0 -0.6 -0.7 -0.8 -0.3
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -2.3 +0.1 -0.3 +0.0 +0.0
carbon source N-acetylneuraminic (C) +0.2 -0.1 -0.2 -1.2 -0.8
carbon source N-acetylneuraminic (C) +0.5 +0.0 -0.2 -1.4 -0.7
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.7 -0.3 -0.6 -0.5 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +1.7 -0.5 -0.5 -1.0 -0.4
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -1.5 +0.4 +0.3 -0.0 +0.4
carbon source Beta-Lactose 2.5 mg/ml (C) -2.5 +0.4 +0.5 +0.6 +0.6
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.8 -0.4 -0.1 +0.6 +0.6
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -1.2 -0.1 -0.1 +0.5 +0.9
carbon source D-Glucose 5 mg/ml (C) +1.4 -0.3 -0.2 -0.4 -0.3
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +1.6 -0.4 -0.4 -0.4 -0.2
carbon source Amylopectin from Potato (C) -1.7 -0.3 +0.2 +0.9 +1.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -0.9 +0.7 +0.5 +0.1 +0.0
carbon source Glycogen; autoclaved 2.5 mg/ml (C) +1.5 -0.4 -0.1 -0.3 +0.1
carbon source Amylopectin from Potato (C) -1.3 -0.2 +0.2 +1.0 +1.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +1.3 -0.5 -0.3 +0.3 +0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +2.1 -0.3 -0.6 -0.0 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +1.7 -0.3 -0.1 -0.1 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +1.9 +0.0 -0.1 -0.3 +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 -0.4 +0.4 +1.0 +0.7
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.7 +1.0 +0.6 -0.3 +0.2
carbon source polygalacturonic (ultrapure) (C) +0.4 +0.2 +0.3 +0.8 +0.6
carbon source polygalacturonic (ultrapure) (C) +0.7 +0.3 +0.3 +0.9 +0.5
carbon source amylopectin from maize (C) +0.6 -0.1 +0.1 +1.1 +0.8
carbon source amylopectin from maize (C) +1.5 -0.2 -0.2 +0.5 +1.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.6 -0.2 +0.6 +0.9 +0.9
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.1 +0.8 +0.5 +0.9 +0.9
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +1.0 +0.7 +0.3 +0.7 +0.8
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