Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS05945 and ABI39_RS05950 are separated by 155 nucleotidesABI39_RS05950 and ABI39_RS05955 are separated by 75 nucleotidesABI39_RS05955 and ABI39_RS05960 are separated by 3 nucleotidesABI39_RS05960 and ABI39_RS05965 are separated by 15 nucleotides ABI39_RS05945: ABI39_RS05945 - L-aspartate oxidase, at 1,652,312 to 1,653,892 _RS05945 ABI39_RS05950: ABI39_RS05950 - ORF6N domain-containing protein, at 1,654,048 to 1,654,608 _RS05950 ABI39_RS05955: ABI39_RS05955 - PH domain-containing protein, at 1,654,684 to 1,655,094 _RS05955 ABI39_RS05960: ABI39_RS05960 - PH domain-containing protein, at 1,655,098 to 1,655,511 _RS05960 ABI39_RS05965: ABI39_RS05965 - dihydrolipoyl dehydrogenase, at 1,655,527 to 1,656,867 _RS05965
Group Condition ABI39_RS05945 ABI39_RS05950 ABI39_RS05955 ABI39_RS05960 ABI39_RS05965
carbon source Galactan from Potato (C) N.D. -0.3 -0.4 -0.4 -0.0
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) N.D. -0.1 -0.2 -0.3 -0.5
carbon source Mucin from porcine stomach,Type II (C) N.D. -0.2 -0.1 -0.5 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) N.D. -0.6 -0.3 -0.0 -0.1
carbon source amylopectin from maize (C) N.D. -0.4 -0.5 -0.2 +0.2
carbon source Mucin from porcine stomach type III (C) N.D. -0.1 -0.2 -0.2 -0.2
carbon source Mucin from porcine stomach type III (C) N.D. -0.0 -0.1 -0.4 -0.3
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) N.D. +0.0 -0.0 -0.6 -0.2
carbon source Mucin from porcine stomach,Type II (C) N.D. +0.1 -0.2 -0.2 -0.4
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. +0.1 +0.2 -1.1 +0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.3 -0.5 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) N.D. +0.5 -0.0 -0.8 +0.1
carbon source Amylopectin from Potato (C) N.D. -0.5 +0.0 +0.1 +0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. -0.0 -0.0 -0.5 +0.4
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. -0.2 +0.2 -0.4 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. +0.1 +0.1 -0.4 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.0 +0.2 -0.6 +0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.3 -0.7 +0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.1 -0.5 +0.2
carbon source amylopectin from maize (C) N.D. +0.7 -0.5 -0.2 +0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. +0.2 +0.2 -0.3 +0.3
carbon source D-Glucosamine Hydrochloride 2.5 mg/ml (C) N.D. +0.3 -0.0 -0.2 +0.3
carbon source Amylopectin from Potato (C) N.D. -0.3 -0.1 +0.4 +0.3
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) N.D. +0.4 -0.1 +0.0 +0.3
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. +0.4 +0.2 -0.1 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. +0.4 -0.0 +0.2 +0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. +0.2 +0.3 +0.0 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. +0.2 +0.4 +0.0 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.0 +0.5 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. +0.3 +0.2 +0.3 +0.2
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